Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1639 Fragaria x ananassa HOM05D019745 ORTHO05D035740 1.5e-28 129.0 77 100.0
FvH4_4g24930 Fragaria vesca HOM05D019745 ORTHO05D035740 5.8e-28 127.1 77 98.7
FAN21G0526 Fragaria x ananassa HOM05D019745 ORTHO05D035740 1.9e-26 122.1 74 98.6
FvH4_3g08460 Fragaria vesca HOM05D000190 ORTHO05D000113 3.4e-12 74.7 43 93.0
FAN11G3644 Fragaria x ananassa HOM05D000190 ORTHO05D000113 3.4e-12 74.7 43 93.0
FAN16G2141 Fragaria x ananassa HOM05D000190 ORTHO05D000113 3.4e-12 74.7 43 93.0
RcHm_v2.0_Chr5g0009371 Rosa chinensis HOM05D000190 ORTHO05D000113 2.5e-10 68.6 42 85.7
FAN21G0871 Fragaria x ananassa HOM05D000190 ORTHO05D000113 7.9e-09 63.5 44 81.8
FAN08G0863 Fragaria x ananassa HOM05D023056 ORTHO05D210760 2.3e-08 62.0 33 100.0
Atru.chr10.1777 Acer truncatum HOM05D000190 ORTHO05D000113 3.0e-08 61.6 42 76.2
TWI63G0073 Tripterygium wilfordii HOM05D000190 ORTHO05D000113 1.1e-07 59.7 40 80.0
Manes.16G032800 Manihot esculenta HOM05D000190 ORTHO05D000113 4.4e-07 57.8 42 69.0
TWI38G2000 Tripterygium wilfordii HOM05D000190 ORTHO05D000113 4.4e-07 57.8 42 73.8
CiPaw.10G053300 Carya illinoinensis HOM05D000190 ORTHO05D000113 9.7e-07 56.6 42 71.4
QL05p043148 Quercus lobata HOM05D000190 ORTHO05D000113 9.7e-07 56.6 42 66.7
Thecc.06G179900 Theobroma cacao HOM05D000190 ORTHO05D000113 9.7e-07 56.6 57 59.6
CiPaw.09G064400 Carya illinoinensis HOM05D000190 ORTHO05D000113 1.3e-06 56.2 42 73.8
Gorai.011G030800 Gossypium raimondii HOM05D000190 ORTHO05D000113 1.7e-06 55.8 57 57.9
PGR042G0361 Punica granatum HOM05D000190 ORTHO05D000113 1.7e-06 55.8 42 66.7
Rhsim13G0180800 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.7e-06 55.8 42 69.0
COL.COLO4_31404 Corchorus olitorius HOM05D000190 ORTHO05D000113 2.8e-06 55.1 42 71.4
Dinv17364 Davidia involucrata HOM05D000190 ORTHO05D000113 3.7e-06 54.7 42 71.4
CANSAT35G1972 Cannabis sativa HOM05D000190 ORTHO05D000113 4.8e-06 54.3 57 56.1
Gohir.D10G028900 Gossypium hirsutum HOM05D000190 ORTHO05D000113 4.8e-06 54.3 57 56.1
Hma1.2p1_1658F.1_g296110 Hydrangea macrophylla HOM05D000190 ORTHO05D000113 4.8e-06 54.3 42 69.0
Sabra04G0031500 Salix brachista HOM05D000190 ORTHO05D000113 4.8e-06 54.3 42 71.4
Gohir.A10G028500 Gossypium hirsutum HOM05D000190 ORTHO05D000113 6.3e-06 53.9 42 69.0
Gohir.D09G073500 Gossypium hirsutum HOM05D000190 ORTHO05D000113 6.3e-06 53.9 42 73.8
Gorai.006G088500 Gossypium raimondii HOM05D000190 ORTHO05D000113 6.3e-06 53.9 42 73.8


User provided reference genes

Program Settings