Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1621 Fragaria x ananassa HOM05D000067 ORTHO05D046563 5.3e-34 147.1 75 100.0
FAN19G3103 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.4e-26 122.5 74 83.8
FAN26G0559 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.4e-26 122.5 74 83.8
FAN16G0612 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.3e-26 120.6 74 82.4
RcHm_v2.0_Chr5g0038101 Rosa chinensis HOM05D000067 ORTHO05D000097 3.9e-21 104.4 76 71.1
RcHm_v2.0_Chr5g0065101 Rosa chinensis HOM05D000067 ORTHO05D000097 2.6e-20 101.7 74 71.6
RcHm_v2.0_Chr5g0038021 Rosa chinensis HOM05D000067 ORTHO05D000097 1.8e-18 95.5 76 69.7
QL11p017188 Quercus lobata HOM05D000067 ORTHO05D000097 7.7e-09 63.5 45 64.4
QL11p017294 Quercus lobata HOM05D000067 ORTHO05D000097 1.0e-08 63.2 61 50.8
RcHm_v2.0_Chr5g0060571 Rosa chinensis HOM05D000067 ORTHO05D000097 1.0e-08 63.2 62 58.1
MD03G1218400 Malus domestica HOM05D000067 ORTHO05D000097 2.9e-08 61.6 65 49.2
RcHm_v2.0_Chr7g0210371 Rosa chinensis HOM05D000067 ORTHO05D000097 2.9e-08 61.6 67 52.2
CSS0039045 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 3.8e-08 61.2 48 58.3
Cfa008046 Carpinus fangiana HOM05D000067 ORTHO05D000097 3.8e-08 61.2 73 46.6
CiPaw.12G125200 Carya illinoinensis HOM05D000067 ORTHO05D000097 3.8e-08 61.2 67 53.7
FvH4_5g06470 Fragaria vesca HOM05D000067 ORTHO05D000097 3.8e-08 61.2 73 45.2
FAN01G2138 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.8e-08 61.2 44 72.7
FAN07G0028 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.8e-08 61.2 63 60.3
CSS0031462 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 5.0e-08 60.8 48 56.2
QL11p016779 Quercus lobata HOM05D000067 ORTHO05D000097 5.0e-08 60.8 45 62.2
QL11p017339 Quercus lobata HOM05D000067 ORTHO05D000097 5.0e-08 60.8 45 62.2
RcHm_v2.0_Chr6g0246001 Rosa chinensis HOM05D000067 ORTHO05D000097 5.0e-08 60.8 67 55.2
FvH4_3g01590 Fragaria vesca HOM05D000067 ORTHO05D000097 6.5e-08 60.5 67 59.7
FAN09G3984 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.5e-08 60.5 63 58.7
FAN22G1761 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.5e-08 60.5 67 58.2
RcHm_v2.0_Chr7g0227831 Rosa chinensis HOM05D000067 ORTHO05D000097 6.5e-08 60.5 70 45.7
FAN13G2368 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.5e-08 60.1 73 43.8
FAN17G0455 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.5e-08 60.1 63 58.7
QL11p016713 Quercus lobata HOM05D000067 ORTHO05D000097 8.5e-08 60.1 61 49.2
RcHm_v2.0_Chr4g0399341 Rosa chinensis HOM05D000067 ORTHO05D046563 8.5e-08 60.1 43 65.1
RcHm_v2.0_Chr6g0245681 Rosa chinensis HOM05D000067 ORTHO05D000097 8.5e-08 60.1 62 58.1
RcHm_v2.0_Chr6g0245751 Rosa chinensis HOM05D000067 ORTHO05D000097 8.5e-08 60.1 62 58.1
Dinv22324 Davidia involucrata HOM05D000067 ORTHO05D000097 1.1e-07 59.7 48 62.5
FvH4_4g27952 Fragaria vesca HOM05D000067 ORTHO05D000097 1.1e-07 59.7 63 58.7
FAN25G1257 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.1e-07 59.7 63 58.7
RcHm_v2.0_Chr1g0313881 Rosa chinensis HOM05D000067 ORTHO05D000097 1.1e-07 59.7 59 50.8
RcHm_v2.0_Chr4g0418071 Rosa chinensis HOM05D000067 ORTHO05D000097 1.1e-07 59.7 64 59.4
CSS0006343 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.5e-07 59.3 48 56.2
RcHm_v2.0_Chr1g0326011 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-07 59.3 46 58.7
RcHm_v2.0_Chr1g0326051 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-07 59.3 46 58.7
RcHm_v2.0_Chr1g0326061 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-07 59.3 46 58.7
RcHm_v2.0_Chr1g0326071 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-07 59.3 46 58.7
RcHm_v2.0_Chr1g0326251 Rosa chinensis HOM05D000067 ORTHO05D000097 1.9e-07 58.9 64 51.6
RcHm_v2.0_Chr5g0036921 Rosa chinensis HOM05D000067 ORTHO05D000097 1.9e-07 58.9 65 50.8
GSVIVG01014569001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.9e-07 58.9 69 50.7
FvH4_5g06530 Fragaria vesca HOM05D000067 ORTHO05D000097 2.5e-07 58.5 73 43.8
FAN02G4166 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.5e-07 58.5 62 59.7
FAN14G1041 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.5e-07 58.5 61 60.7
FAN14G2132 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.5e-07 58.5 61 60.7
QL08p014204 Quercus lobata HOM05D000067 ORTHO05D000097 2.5e-07 58.5 52 61.5
QL11p016651 Quercus lobata HOM05D000067 ORTHO05D000097 2.5e-07 58.5 61 47.5
FAN12G1301 Fragaria x ananassa HOM05D000121 ORTHO05D000102 3.2e-07 58.2 63 57.1
QL11p016833 Quercus lobata HOM05D000067 ORTHO05D000097 3.2e-07 58.2 45 60.0
RcHm_v2.0_Chr1g0326391 Rosa chinensis HOM05D000067 ORTHO05D000097 3.2e-07 58.2 68 50.0
FAN13G1677 Fragaria x ananassa HOM05D000067 ORTHO05D000097 4.2e-07 57.8 64 45.3
RcHm_v2.0_Chr7g0228501 Rosa chinensis HOM05D000067 ORTHO05D000097 4.2e-07 57.8 70 42.9
vmacro23065 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 4.2e-07 57.8 60 48.3
vmacro23066 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 4.2e-07 57.8 60 48.3
GSVIVG01014566001 Vitis vinifera HOM05D000067 ORTHO05D000097 4.2e-07 57.8 69 49.3
CAN.G307.18 Capsicum annuum HOM05D000067 ORTHO05D000097 5.5e-07 57.4 47 48.9
Eucgr.L01631 Eucalyptus grandis HOM05D000067 ORTHO05D000097 5.5e-07 57.4 66 42.4
FvH4_6g11440 Fragaria vesca HOM05D000067 ORTHO05D000097 5.5e-07 57.4 54 61.1
MD12G1163000 Malus domestica HOM05D000067 ORTHO05D000097 5.5e-07 57.4 58 51.7
Prupe.4G199200 Prunus persica HOM05D000067 ORTHO05D000097 5.5e-07 57.4 67 50.7
RcHm_v2.0_Chr5g0059501 Rosa chinensis HOM05D000067 ORTHO05D000097 5.5e-07 57.4 65 50.8
RcHm_v2.0_Chr5g0059511 Rosa chinensis HOM05D000067 ORTHO05D000097 5.5e-07 57.4 65 50.8
TAR624G1254 Trochodendron aralioides HOM05D000067 ORTHO05D000097 5.5e-07 57.4 44 56.8
Haze_20181 Corylus avellana HOM05D000067 ORTHO05D000097 7.2e-07 57.0 48 62.5
FAN06G1624 Fragaria x ananassa HOM05D000067 ORTHO05D000097 7.2e-07 57.0 46 58.7
Sed0020954 Sechium edule HOM05D000067 ORTHO05D000097 7.2e-07 57.0 62 46.8
Cfa020443 Carpinus fangiana HOM05D000067 ORTHO05D000097 9.4e-07 56.6 73 47.9
Haze_09581 Corylus avellana HOM05D000067 ORTHO05D000097 9.4e-07 56.6 48 56.2
DCAR_023152 Daucus carota HOM05D000067 ORTHO05D000097 9.4e-07 56.6 66 43.9
FAN01G1075 Fragaria x ananassa HOM05D000067 ORTHO05D000097 9.4e-07 56.6 67 46.3
RcHm_v2.0_Chr5g0060261 Rosa chinensis HOM05D000067 ORTHO05D000097 9.4e-07 56.6 60 56.7
CiPaw.11G181500 Carya illinoinensis HOM05D000067 ORTHO05D000097 1.2e-06 56.2 67 47.8
CiPaw.12G125300 Carya illinoinensis HOM05D000067 ORTHO05D000097 1.2e-06 56.2 67 47.8
FvH4_7g03620 Fragaria vesca HOM05D000067 ORTHO05D000097 1.2e-06 56.2 46 56.5
FAN03G0608 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.2e-06 56.2 46 56.5
FAN08G2223 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.2e-06 56.2 67 44.8
FAN10G3934 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.2e-06 56.2 46 56.5
Prupe.4G190700 Prunus persica HOM05D000067 ORTHO05D000097 1.2e-06 56.2 68 51.5
Prupe.4G191000 Prunus persica HOM05D000067 ORTHO05D000097 1.2e-06 56.2 68 51.5
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 1.2e-06 56.2 58 51.7
Peaxi162Scf00952g00019 Petunia axillaris HOM05D000067 ORTHO05D000097 1.6e-06 55.8 47 48.9
QL08p014097 Quercus lobata HOM05D000067 ORTHO05D000097 1.6e-06 55.8 59 57.6
FAN04G2822 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.1e-06 55.5 67 46.3
Prupe.4G190800 Prunus persica HOM05D000067 ORTHO05D000097 2.1e-06 55.5 68 50.0
CiPaw.11G181100 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.7e-06 55.1 64 43.8
Dinv11141 Davidia involucrata HOM05D000067 ORTHO05D000097 2.7e-06 55.1 47 55.3
PGR031G1250 Punica granatum HOM05D000067 ORTHO05D000097 2.7e-06 55.1 60 50.0
QL08p020210 Quercus lobata HOM05D000067 ORTHO05D000097 2.7e-06 55.1 71 38.0
Actinidia05165 Actinidia chinensis HOM05D000067 ORTHO05D000097 3.6e-06 54.7 51 45.1
CAN.G594.27 Capsicum annuum HOM05D000067 ORTHO05D000097 3.6e-06 54.7 48 50.0
Cc05_g13070 Coffea canephora HOM05D000067 ORTHO05D000097 3.6e-06 54.7 50 50.0
Duzib170G0344 Durio zibethinus HOM05D000067 ORTHO05D000097 3.6e-06 54.7 80 48.8
MD12G1163400 Malus domestica HOM05D000067 ORTHO05D000097 3.6e-06 54.7 59 49.2
Prupe.4G238800 Prunus persica HOM05D000067 ORTHO05D000097 3.6e-06 54.7 57 50.9
Prupe.4G238900 Prunus persica HOM05D000067 ORTHO05D000097 3.6e-06 54.7 57 52.6
CiPaw.11G181800 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.7e-06 54.3 46 56.5
MD03G1206700 Malus domestica HOM05D000067 ORTHO05D000097 4.7e-06 54.3 45 60.0
Cfa020444 Carpinus fangiana HOM05D000067 ORTHO05D000097 6.1e-06 53.9 69 43.5
Haze_09579 Corylus avellana HOM05D000067 ORTHO05D000097 6.1e-06 53.9 73 41.1
Duzib213G0552 Durio zibethinus HOM05D000067 ORTHO05D000097 6.1e-06 53.9 44 56.8
FAN18G1049 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.1e-06 53.9 68 47.1
Nitab4.5_0002807g0040 Nicotiana tabacum HOM05D000067 ORTHO05D000097 6.1e-06 53.9 56 44.6
Nitab4.5_0006593g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 6.1e-06 53.9 56 44.6
TAR626G0067 Trochodendron aralioides HOM05D000067 ORTHO05D000097 6.1e-06 53.9 45 53.3
TAR627G0464 Trochodendron aralioides HOM05D000067 ORTHO05D000097 6.1e-06 53.9 44 54.5
Cfa020465 Carpinus fangiana HOM05D000067 ORTHO05D000097 8.0e-06 53.5 73 43.8
Cfa020467 Carpinus fangiana HOM05D000067 ORTHO05D000097 8.0e-06 53.5 69 44.9
MELO3C013950.2 Cucumis melo HOM05D000067 ORTHO05D000097 8.0e-06 53.5 65 47.7
FAN10G0071 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.0e-06 53.5 44 65.9
FAN10G1768 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.0e-06 53.5 44 65.9
Peaxi162Scf00141g01436 Petunia axillaris HOM05D000067 ORTHO05D000097 8.0e-06 53.5 67 37.3
Peaxi162Scf00169g00159 Petunia axillaris HOM05D000067 ORTHO05D000097 8.0e-06 53.5 67 37.3
TAR624G1017 Trochodendron aralioides HOM05D000067 ORTHO05D000097 8.0e-06 53.5 44 52.3


User provided reference genes

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