Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1562 Fragaria x ananassa HOM05D004963 ORTHO05D006638 5.2e-162 574.3 288 100.0
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 2.5e-116 422.5 225 95.1
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 8.4e-112 407.5 225 90.7
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 8.1e-107 391.0 225 90.7
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 4.0e-98 362.1 229 80.8
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 8.7e-93 344.4 229 77.7
FvH4_3g31750 Fragaria vesca HOM05D004963 ORTHO05D006638 1.1e-84 317.4 157 98.7
FvH4_4g00580 Fragaria vesca HOM05D004963 ORTHO05D006638 1.4e-82 310.5 157 96.2
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 9.0e-82 307.8 232 68.5
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 3.4e-81 305.8 231 68.8
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 2.9e-80 302.8 231 65.8
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 4.2e-79 298.9 231 66.2
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 3.6e-78 295.8 271 57.2
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 1.8e-77 293.5 227 62.6
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 5.1e-77 292.0 227 63.9
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 2.5e-76 289.7 230 64.3
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 2.5e-76 289.7 230 63.5
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 1.3e-75 287.3 230 63.9
Gohir.D09G029066 Gossypium hirsutum HOM05D004963 ORTHO05D006638 2.2e-75 286.6 230 62.6
Gorai.006G033900 Gossypium raimondii HOM05D004963 ORTHO05D006638 2.2e-75 286.6 230 62.6
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 4.5e-73 278.9 268 54.1
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 4.5e-73 278.9 270 54.1
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 5.9e-73 278.5 232 62.5
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 7.7e-73 278.1 230 59.1
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 1.0e-72 277.7 223 62.8
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 1.3e-72 277.3 227 61.2
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea HOM05D004963 ORTHO05D006638 2.2e-72 276.6 227 60.8
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 2.9e-72 276.2 227 61.2
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 8.5e-72 274.6 232 61.6
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 1.1e-71 274.2 231 58.9
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 1.1e-71 274.2 228 61.0
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 1.4e-71 273.9 270 53.7
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 1.4e-71 273.9 233 61.4
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 2.5e-71 273.1 231 59.7
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 2.5e-71 273.1 230 57.8
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 3.2e-71 272.7 231 60.6
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 4.2e-71 272.3 231 56.7
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 5.5e-71 271.9 231 60.2
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla HOM05D004963 ORTHO05D006638 1.6e-70 270.4 231 60.6
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 6.1e-70 268.5 227 59.0
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 7.9e-70 268.1 231 55.8
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 1.0e-69 267.7 252 57.5
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 3.0e-69 266.2 233 60.5
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 5.1e-69 265.4 231 56.7
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 6.7e-69 265.0 227 61.2
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 6.7e-69 265.0 227 61.2
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 2.0e-68 263.5 227 59.9
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 4.4e-68 262.3 231 61.0
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 4.4e-68 262.3 227 55.9
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 1.3e-67 260.8 229 58.5
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 4.8e-67 258.8 231 55.8
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 3.1e-66 256.1 231 56.3
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 4.1e-66 255.8 227 56.4
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 4.1e-66 255.8 231 56.3
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 1.5e-65 253.8 231 55.8
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 2.6e-65 253.1 228 55.3
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 4.5e-65 252.3 231 56.3
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 1.0e-64 251.1 231 54.5
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 3.8e-64 249.2 228 56.6
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 5.0e-64 248.8 231 54.5
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 3.6e-62 242.7 262 51.5
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 7.9e-62 241.5 226 58.8
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 7.9e-62 241.5 232 52.6
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 1.0e-61 241.1 227 53.3
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 5.7e-60 235.3 227 52.0
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 1.7e-59 233.8 265 50.6
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 6.3e-59 231.9 231 52.8
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 8.2e-59 231.5 228 52.6
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 8.2e-59 231.5 266 48.9
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 8.2e-59 231.5 231 49.4
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 1.8e-58 230.3 227 51.1
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 2.4e-58 229.9 228 52.6
Atru.chr6.2400 Acer truncatum HOM05D004963 ORTHO05D006638 1.2e-57 227.6 161 70.8
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 1.6e-57 227.3 243 48.1
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 2.0e-57 226.9 262 46.2
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 3.8e-56 222.6 232 49.6
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 2.5e-55 219.9 301 43.2
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 6.1e-54 215.3 254 45.7
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 2.3e-53 213.4 232 50.0
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 2.0e-52 210.3 233 52.4
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 3.3e-52 209.5 242 48.8
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 7.5e-52 208.4 426 34.5
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 1.7e-51 207.2 254 44.9
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 4.1e-50 202.6 227 47.1
FvH4_1g22462 Fragaria vesca HOM05D004963 ORTHO05D006638 5.3e-50 202.2 123 82.9
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 1.0e-48 198.0 226 46.9
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 1.7e-48 197.2 265 41.5
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 5.5e-47 192.2 279 41.9
CDE07G1094 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 2.2e-40 170.2 209 44.5
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 1.4e-37 161.0 231 39.8
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 6.8e-37 158.7 151 53.0
Os09g0565500 Oryza sativa ssp. japonica HOM05D004963 ORTHO05D006638 5.7e-36 155.6 231 39.8
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 7.5e-36 155.2 295 34.9
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 7.8e-33 145.2 145 51.0
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 3.4e-28 129.8 107 59.8
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 4.1e-26 122.9 250 30.0
HPP92_013426 Vanilla planifolia HOM05D004963 ORTHO05D006638 9.2e-26 121.7 176 43.2
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 3.9e-24 116.3 242 30.2
Glyma.15G246500 Glycine max HOM05D004963 ORTHO05D006638 5.0e-24 115.9 100 60.0
FAN09G2859 Fragaria x ananassa HOM05D004963 ORTHO05D006638 1.5e-23 114.4 60 98.3
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 3.3e-23 113.2 145 44.1
PGR083G1349 Punica granatum HOM05D004963 ORTHO05D006638 4.1e-18 96.3 113 47.8
SEGI_28921 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 2.3e-16 90.5 115 42.6
CBR_g4854 Chara braunii HOM05D004963 ORTHO05D006638 3.0e-16 90.1 247 25.9
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 8.6e-16 88.6 247 25.9
Carub.0006s0908 Capsella rubella HOM05D004963 ORTHO05D021908 2.1e-14 84.0 135 40.7
C06p05800 Brassica napus HOM05D004963 ORTHO05D021908 7.8e-09 65.5 164 32.3
C06p05790 Brassica napus HOM05D004963 ORTHO05D021908 1.0e-08 65.1 230 27.0
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 3.9e-08 63.2 45 55.6
Psat4g170200 Pisum sativum HOM05D003662 ORTHO05D001824 2.1e-06 57.4 54 48.1


User provided reference genes

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