Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.2e-109 399.8 199 100.0
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.8e-106 388.7 199 97.5
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 4.0e-105 384.8 199 95.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.4e-94 349.7 197 85.3
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 2.4e-94 349.0 197 85.8
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 7.6e-88 327.4 165 97.6
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.9e-83 312.8 196 79.6
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 8.1e-82 307.4 180 80.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.4e-81 306.6 183 78.7
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.4e-81 306.6 189 77.2
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 2.4e-81 305.8 186 78.0
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 6.9e-81 304.3 197 75.1
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 1.2e-80 303.5 195 75.9
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.2e-80 303.5 183 78.1
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.5e-80 303.1 213 68.5
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 2.0e-80 302.8 219 66.7
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 2.0e-80 302.8 179 76.0
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 4.5e-80 301.6 173 81.5
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 7.6e-80 300.8 198 73.7
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.0e-79 300.4 184 77.7
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.9e-79 298.9 196 74.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.9e-79 298.9 189 75.1
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.8e-79 298.5 188 74.5
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 3.8e-79 298.5 179 74.9
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.1e-78 297.0 199 72.9
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.9e-78 296.2 178 78.7
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 2.5e-78 295.8 188 73.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.5e-78 295.8 189 74.1
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.2e-78 295.4 189 74.6
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 5.5e-78 294.7 186 75.3
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 7.1e-78 294.3 181 76.8
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 7.1e-78 294.3 199 70.9
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 9.3e-78 293.9 175 79.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 9.3e-78 293.9 197 72.6
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.2e-77 293.5 174 77.6
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 2.7e-77 292.4 175 77.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 3.5e-77 292.0 196 72.4
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 6.0e-77 291.2 188 73.4
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.0e-76 290.4 196 68.4
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 1.8e-76 289.7 176 77.3
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.3e-76 289.3 193 71.0
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 3.9e-76 288.5 195 71.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 6.7e-76 287.7 174 78.7
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 8.7e-76 287.3 174 76.4
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 8.7e-76 287.3 223 65.0
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.5e-75 286.6 205 68.3
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.5e-75 286.6 178 77.5
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.9e-75 286.2 175 75.4
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 3.3e-75 285.4 195 69.7
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 5.7e-75 284.6 176 77.3
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 7.4e-75 284.3 180 73.3
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.1e-73 280.4 195 68.7
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.1e-73 280.4 195 67.7
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.2e-72 276.9 199 68.3
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 2.9e-71 272.3 199 66.3
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 3.8e-71 271.9 202 65.8
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 6.5e-71 271.2 176 71.0
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.4e-70 270.0 189 69.3
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.4e-70 270.0 179 70.9
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 2.5e-70 269.2 176 72.7
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 9.3e-70 267.3 164 77.4
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 3.6e-69 265.4 186 69.4
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 6.1e-69 264.6 188 69.7
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-68 263.5 184 68.5
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.3e-68 263.5 184 68.5
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.8e-68 263.1 189 70.9
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-68 263.1 189 70.9
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.8e-68 263.1 189 70.9
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 3.9e-68 261.9 174 73.0
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 8.7e-68 260.8 174 71.8
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 8.7e-68 260.8 189 68.8
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 8.7e-68 260.8 189 68.8
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 2.5e-67 259.2 200 66.0
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 5.7e-67 258.1 182 66.5
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 9.7e-67 257.3 191 67.0
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 1.3e-66 256.9 174 71.3
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.2e-66 256.1 199 69.8
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 3.7e-66 255.4 210 61.4
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.2e-66 254.2 186 70.4
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.4e-65 253.4 181 69.6
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-65 253.1 173 69.9
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 4.1e-65 251.9 193 64.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 4.1e-65 251.9 173 69.9
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 5.3e-65 251.5 182 68.7
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 6.9e-65 251.1 181 68.5
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.2e-64 250.4 171 66.7
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.5e-64 250.0 173 69.4
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 7.7e-64 247.7 182 66.5
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.1e-62 243.8 175 68.0
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.4e-62 243.4 137 79.6
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.7e-61 239.2 179 65.9
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.1e-59 233.8 167 68.3
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.3e-59 232.3 147 73.5
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 3.7e-58 228.8 184 62.0
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 8.5e-55 217.6 196 60.7
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 8.5e-55 217.6 143 74.8
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 3.2e-54 215.7 158 67.7
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 6.7e-52 208.0 169 58.6
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 6.3e-50 201.4 190 56.8
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.7e-48 194.5 163 60.7
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 1.7e-47 193.4 169 55.0
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 2.2e-47 193.0 149 64.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.5e-46 190.3 170 52.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 9.4e-46 187.6 124 72.6
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 2.6e-43 179.5 180 48.9
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 6.3e-42 174.9 140 62.1
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.2e-40 170.6 179 51.4
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 5.0e-39 165.2 106 67.9
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 2.0e-35 153.3 123 64.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 5.7e-35 151.8 106 66.0
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 8.3e-34 147.9 85 81.2
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 9.1e-33 144.4 112 60.7
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 3.5e-32 142.5 132 58.3
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.6e-29 133.7 86 70.9
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 2.3e-28 129.8 117 58.1
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.0e-24 116.7 126 50.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.0e-24 116.7 85 61.2
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 4.5e-24 115.5 109 53.2
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.5e-22 109.8 63 76.2
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.2e-21 107.5 71 74.6
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 5.7e-19 98.6 99 56.6
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 9.8e-19 97.8 131 42.7
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.0e-15 87.8 237 26.2
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 2.3e-15 86.7 54 70.4
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.9e-14 83.6 71 62.0
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 4.7e-13 79.0 101 47.5
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 9.8e-11 71.2 42 85.7
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 9.8e-11 71.2 44 72.7
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 1.1e-09 67.8 195 33.3
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 4.1e-09 65.9 48 66.7


User provided reference genes

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