Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1356 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.2e-110 401.7 202 100.0
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.9e-86 322.8 162 100.0
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 8.6e-79 297.4 199 79.9
FAN11G4028 Fragaria x ananassa HOM05D000379 ORTHO05D000254 2.2e-74 282.7 174 86.2
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.9e-71 272.3 185 77.8
FAN09G4859 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.9e-65 253.1 185 72.4
FAN05G3326 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.0e-63 245.7 185 70.8
FAN05G2698 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.1e-57 225.3 153 76.5
FAN28G1495 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.0e-48 194.9 145 68.3
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 1.7e-47 193.4 187 57.2
FAN01G3000 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.1e-44 184.1 177 55.9
FAN01G0657 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.0e-44 182.2 146 63.7
FAN05G0189 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.4e-43 178.7 86 96.5
FAN17G2077 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.9e-36 154.8 71 98.6
FAN12G1343 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.9e-31 139.0 182 48.4
FAN21G1845 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.3e-30 136.0 142 62.0
FAN02G1571 Fragaria x ananassa HOM05D007856 ORTHO05D003348 9.6e-30 134.4 85 82.4
FvH4_2g08146 Fragaria vesca HOM05D007856 ORTHO05D003348 2.8e-29 132.9 176 52.3
FAN05G5829 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.9e-28 128.3 106 72.6
FAN20G1111 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.5e-24 115.9 64 100.0
FAN05G0633 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.3e-23 113.2 63 95.2
FAN17G1070 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.5e-22 109.8 55 83.6
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 4.3e-22 109.0 187 37.4
FAN24G2379 Fragaria x ananassa HOM05D007856 ORTHO05D003348 9.6e-22 107.8 237 34.2
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 2.1e-21 106.7 174 37.4
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 2.8e-21 106.3 212 35.8
FAN13G0021 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.7e-21 105.9 106 58.5
FAN16G3654 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.6e-19 99.8 134 47.8
FvH4_2g20780 Fragaria vesca HOM05D007856 ORTHO05D003348 1.3e-18 97.4 198 38.4
FAN20G3088 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.8e-18 95.9 178 36.0
FAN05G3444 Fragaria x ananassa HOM05D007856 ORTHO05D003348 8.4e-18 94.7 146 45.2
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 8.4e-18 94.7 80 52.5
FAN10G0022 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.5e-17 92.0 57 71.9
FAN21G3637 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.0e-15 87.8 173 34.1
FAN24G0953 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.0e-15 87.8 97 51.5
FAN01G2173 Fragaria x ananassa HOM05D030232 ORTHO05D003348 1.1e-14 84.3 47 78.7
FAN01G1809 Fragaria x ananassa HOM05D007856 ORTHO05D003348 7.4e-14 81.6 117 42.7
FAN06G4964 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.4e-12 76.6 113 37.2
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.1e-12 76.3 113 37.2
MD08G1229500 Malus domestica HOM05D006849 ORTHO05D003348 6.9e-12 75.1 85 43.5
FAN20G0190 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.6e-11 73.2 177 32.8
RcHm_v2.0_Chr5g0004901 Rosa chinensis HOM05D006849 ORTHO05D003348 2.2e-10 70.1 78 43.6
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.1e-09 67.8 123 34.1
RcHm_v2.0_Chr2g0135141 Rosa chinensis HOM05D006849 ORTHO05D003348 1.9e-09 67.0 89 37.1
FAN10G2903 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.5e-09 65.5 123 38.2
MD17G1262000 Malus domestica HOM05D006849 ORTHO05D003348 9.3e-09 64.7 106 37.7
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.1e-08 63.5 109 33.9
FAN24G2652 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.7e-08 63.2 136 33.8
MD14G1125700 Malus domestica HOM05D006849 ORTHO05D003348 2.7e-08 63.2 75 42.7
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 2.7e-08 63.2 203 25.6
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 3.5e-08 62.8 183 26.8
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.1e-08 62.0 109 35.8
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.9e-08 61.6 185 29.2
Thecc.04G012000 Theobroma cacao HOM05D000096 ORTHO05D000045 7.9e-08 61.6 81 35.8
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 1.0e-07 61.2 185 29.2
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 1.0e-07 61.2 188 27.7
Thecc.03G185000 Theobroma cacao HOM05D007876 ORTHO05D000065 1.0e-07 61.2 81 35.8
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 2.3e-07 60.1 88 29.5
FAN27G1530 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.0e-07 59.7 111 30.6
FAN19G3137 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.9e-07 59.3 112 32.1
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 3.9e-07 59.3 92 35.9
FvH4_3g10140 Fragaria vesca HOM05D007856 ORTHO05D003348 5.1e-07 58.9 133 32.3
AL8G11070 Arabidopsis lyrata HOM05D000305 ORTHO05D000065 6.7e-07 58.5 101 32.7
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 6.7e-07 58.5 88 29.5
Thecc.04G155200 Theobroma cacao HOM05D000096 ORTHO05D000045 8.7e-07 58.2 81 34.6
Thecc.09G096600 Theobroma cacao HOM05D000096 ORTHO05D000045 8.7e-07 58.2 81 34.6
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 7.4e-06 55.1 177 26.0


User provided reference genes

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