Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-244 849.0 448 100.0
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 1.5e-240 835.9 448 98.9
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.1e-222 776.5 437 95.7
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 7.4e-208 727.2 410 96.3
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.4e-206 723.0 410 95.4
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 1.6e-189 666.4 410 87.6
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 4.9e-151 538.5 419 68.7
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.2e-141 507.3 415 65.8
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.1e-122 443.4 416 60.1
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 3.8e-119 432.6 422 57.6
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 2.1e-114 416.8 421 55.1
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 4.9e-111 405.6 420 54.8
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.4e-110 404.1 407 56.5
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 9.3e-110 401.4 413 54.5
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 1.1e-107 394.4 353 59.8
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.8e-106 389.8 355 56.9
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 6.3e-106 388.7 355 56.6
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.1e-105 387.9 410 53.4
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.8e-105 387.1 351 57.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.8e-105 387.1 358 58.7
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.0e-104 383.6 347 56.2
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.0e-103 381.3 421 51.3
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.2e-103 380.2 419 52.7
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.9e-103 379.8 351 57.5
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 6.5e-103 378.6 412 51.9
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 5.5e-102 375.6 416 52.6
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 7.2e-102 375.2 421 51.8
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 9.4e-102 374.8 353 58.1
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.2e-101 374.4 351 54.4
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.6e-101 374.0 416 51.7
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-101 373.6 365 59.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 3.0e-100 369.8 347 54.5
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 5.1e-100 369.0 350 56.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 8.8e-100 368.2 421 53.2
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.0e-99 367.1 352 55.7
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.5e-99 366.7 360 55.3
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.1e-97 361.3 421 48.9
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.1e-97 361.3 421 48.9
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.8e-97 360.5 408 51.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 2.4e-97 360.1 360 55.3
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 5.3e-97 359.0 417 50.1
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 5.0e-95 352.4 418 49.3
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 8.5e-95 351.7 360 53.3
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 9.4e-94 348.2 352 55.1
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 3.0e-92 343.2 404 48.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 5.1e-92 342.4 426 47.9
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.3e-91 339.7 421 47.5
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.3e-91 339.7 426 47.7
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 7.4e-91 338.6 422 48.1
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 2.8e-90 336.7 408 49.0
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 6.3e-90 335.5 326 56.7
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 2.4e-89 333.6 337 55.8
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 5.9e-88 328.9 352 50.9
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.0e-87 328.2 329 55.6
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 2.2e-87 327.0 418 44.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 4.2e-86 322.8 354 53.1
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 2.7e-85 320.1 320 56.2
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 4.7e-85 319.3 353 49.6
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 8.0e-85 318.5 421 47.7
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 8.8e-84 315.1 350 50.3
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 2.6e-83 313.5 351 51.6
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 4.4e-83 312.8 352 50.3
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.3e-82 311.2 423 45.6
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 3.7e-82 309.7 355 49.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 3.1e-81 306.6 348 48.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 5.3e-81 305.8 348 49.4
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 7.0e-81 305.4 348 48.9
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.3e-79 301.2 351 49.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-79 301.2 350 48.6
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 3.8e-79 299.7 348 48.0
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 6.5e-79 298.9 355 50.7
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.5e-78 297.7 289 56.4
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 9.4e-78 295.0 353 51.0
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.7e-77 293.5 351 50.4
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 3.6e-77 293.1 348 51.1
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 6.1e-77 292.4 426 44.8
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 8.0e-77 292.0 347 48.7
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.0e-76 290.0 347 51.0
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 6.8e-76 288.9 351 50.1
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.5e-75 287.7 413 43.8
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 2.6e-75 287.0 351 47.6
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 8.3e-74 282.0 349 49.6
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 8.3e-74 282.0 348 49.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 8.3e-74 282.0 348 49.7
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.0e-72 277.3 361 47.6
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 5.9e-72 275.8 341 47.8
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 3.8e-71 273.1 354 48.0
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 2.5e-70 270.4 267 53.2
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 6.8e-68 262.3 340 45.3
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 3.7e-66 256.5 292 52.1
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 8.3e-66 255.4 353 45.6
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 5.4e-65 252.7 307 49.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 2.0e-64 250.8 292 51.0
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.6e-63 245.4 243 60.1
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.6e-63 245.4 243 60.1
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 4.2e-62 243.0 236 58.5
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.5e-59 234.6 357 39.8
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.5e-54 218.0 353 40.8
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 1.3e-50 204.9 358 39.4
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 1.9e-49 201.1 352 39.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.6e-40 171.4 321 36.4
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 4.6e-40 169.9 234 47.0
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.3e-39 167.5 243 47.7
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.7e-37 159.8 267 40.1
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 8.6e-31 139.0 350 30.9
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.9e-30 137.9 124 58.9
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.9e-30 137.9 124 58.9
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 2.1e-29 134.4 157 51.0
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 6.4e-26 122.9 129 53.5
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 1.4e-25 121.7 184 47.3
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.2e-24 118.6 221 40.7
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 3.5e-24 117.1 127 50.4
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.6e-24 116.7 114 53.5
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 3.3e-22 110.5 308 31.5
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 2.6e-19 100.9 334 29.6
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 3.3e-14 84.0 110 41.8
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 4.2e-09 67.0 305 25.9
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 6.7e-07 59.7 62 54.8


User provided reference genes

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