Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.1e-284 980.7 495 100.0
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.3e-282 974.9 495 99.4
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.2e-279 963.8 495 98.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 7.5e-278 959.9 495 98.0
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 7.3e-265 916.8 494 93.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 7.9e-235 817.0 494 83.6
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.9e-233 812.4 494 83.2
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 3.1e-231 805.1 501 82.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.9e-212 742.7 494 76.1
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 9.4e-212 740.3 474 78.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.5e-209 733.0 474 77.4
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.3e-209 731.9 494 73.5
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.8e-208 728.8 476 76.1
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.3e-207 724.5 481 76.5
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 9.1e-207 723.8 476 77.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 9.1e-207 723.8 479 74.9
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.2e-206 723.4 455 78.5
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 1.2e-206 723.4 469 76.5
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 2.0e-206 722.6 467 76.7
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.0e-205 720.3 480 75.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.3e-205 719.9 475 76.0
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.7e-205 719.5 469 75.9
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.0e-205 718.0 470 75.1
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 6.5e-205 717.6 456 77.2
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 8.5e-205 717.2 456 77.0
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.9e-204 716.1 490 72.9
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.6e-203 713.0 469 75.5
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 6.1e-203 711.1 476 74.8
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.3e-202 709.1 520 71.7
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 8.8e-202 707.2 487 72.9
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.5e-201 706.4 470 73.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.6e-201 705.7 478 73.8
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 4.4e-201 704.9 476 73.1
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.7e-201 703.7 491 73.1
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.2e-200 702.6 478 73.8
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 3.7e-200 701.8 478 73.6
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.1e-199 698.7 494 70.9
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 1.2e-198 696.8 472 74.2
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.6e-198 696.4 493 72.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 2.0e-198 696.0 469 72.7
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 2.6e-198 695.7 475 72.2
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.6e-198 695.7 478 73.0
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 4.5e-198 694.9 452 76.8
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 6.5e-197 691.0 499 69.7
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 4.2e-196 688.3 471 71.1
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 4.2e-196 688.3 493 69.6
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-195 686.4 465 73.3
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.6e-195 685.3 479 71.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 3.0e-194 682.2 499 68.9
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 7.5e-193 677.6 469 72.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 9.7e-193 677.2 458 71.8
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 2.2e-192 676.0 464 72.6
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.8e-192 675.6 453 74.0
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 4.8e-192 674.9 465 71.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.2e-190 670.2 460 73.3
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.6e-190 669.8 483 70.6
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 3.5e-190 668.7 483 70.8
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.0e-189 667.2 443 73.4
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 4.0e-186 655.2 437 76.2
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.6e-185 652.5 499 66.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 4.8e-184 648.3 447 72.0
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 4.8e-184 648.3 444 70.9
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.1e-183 647.1 457 70.2
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.4e-183 646.7 469 68.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.5e-182 642.1 469 67.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.9e-182 641.3 469 67.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 8.6e-181 637.5 469 66.3
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.5e-180 636.7 479 68.1
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.1e-179 632.9 471 66.0
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.4e-178 630.2 445 71.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.2e-178 628.2 439 70.8
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 2.8e-176 622.5 414 73.9
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 4.1e-175 618.6 491 64.8
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.2e-174 617.1 492 64.6
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 3.5e-174 615.5 441 68.3
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.9e-173 612.5 474 64.3
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.5e-172 610.1 452 65.5
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 3.3e-172 609.0 460 65.2
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.8e-170 603.2 506 61.1
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 6.8e-170 601.3 490 62.0
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.0e-169 599.7 459 63.6
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.4e-169 599.0 456 63.8
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.9e-168 595.9 459 64.1
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 5.4e-167 591.7 458 62.9
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.0e-165 587.4 457 64.6
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.0e-165 585.1 462 63.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.2e-163 580.5 485 60.0
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.6e-163 578.9 485 59.8
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 2.3e-162 576.2 457 61.3
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 6.8e-162 574.7 452 61.5
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 4.4e-161 572.0 446 62.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 3.5e-158 562.4 476 59.5
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.0e-157 559.3 398 70.4
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.2e-155 553.9 381 75.1
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 5.1e-149 531.9 354 72.9
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.4e-143 511.9 415 60.2
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.1e-140 504.2 459 55.6
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.1e-138 497.7 427 58.1
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.5e-129 467.2 398 61.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 7.1e-127 458.4 298 75.2
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.3e-112 411.0 388 54.9
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 6.5e-112 408.7 257 78.6
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.0e-109 401.4 425 47.3
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 3.6e-94 349.7 449 43.2
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.6e-89 333.6 423 47.8
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.0e-84 317.4 230 68.7
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 9.4e-79 298.5 239 65.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.8e-66 257.7 426 35.7
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 3.5e-65 253.4 150 81.3
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 5.0e-64 249.6 418 35.4
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 2.8e-59 233.8 134 84.3
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.4e-53 214.9 176 60.8
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.7e-41 174.1 228 45.2
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.7e-40 171.4 228 45.6
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 9.2e-34 149.1 192 42.2
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.5e-33 147.1 127 59.1
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.6e-33 146.7 149 53.7
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.2e-27 127.9 108 55.6
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.2e-18 97.4 143 40.6


User provided reference genes

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