Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.1e-78 294.7 148 100.0
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 8.5e-76 287.0 148 98.6
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.3e-71 273.1 148 95.3
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 2.4e-70 268.9 148 93.2
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 4.4e-48 194.9 145 73.1
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 1.7e-47 193.0 153 70.6
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.8e-47 192.2 147 70.7
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 9.5e-35 150.6 145 56.6
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 1.0e-33 147.1 143 59.4
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 5.2e-33 144.8 144 55.6
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 9.8e-32 140.6 143 54.5
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 1.7e-31 139.8 138 58.7
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 4.9e-31 138.3 135 58.5
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.4e-30 136.7 145 54.5
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.4e-30 136.7 142 55.6
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 2.4e-30 136.0 142 56.3
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 4.1e-30 135.2 144 56.2
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 9.2e-30 134.0 148 52.7
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 1.6e-29 133.3 136 57.4
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 2.7e-29 132.5 142 53.5
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.6e-29 131.7 150 53.3
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 4.6e-29 131.7 150 53.3
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 7.8e-29 131.0 142 56.3
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 7.8e-29 131.0 142 52.8
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.0e-28 130.6 150 53.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 2.3e-28 129.4 148 48.6
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 3.0e-28 129.0 132 59.1
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.9e-27 126.3 145 49.7
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.5e-27 125.9 145 48.3
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.3e-27 125.2 142 53.5
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 5.6e-27 124.8 143 55.2
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 7.3e-27 124.4 157 50.3
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 7.3e-27 124.4 132 56.1
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 3.6e-26 122.1 144 48.6
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 3.6e-26 122.1 140 50.7
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 4.7e-26 121.7 144 47.9
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 6.2e-26 121.3 150 51.3
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.2e-26 121.3 145 46.9
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 8.0e-26 120.9 141 48.2
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 8.0e-26 120.9 145 49.0
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 1.1e-25 120.6 143 50.3
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.4e-25 120.2 144 48.6
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.8e-25 119.8 143 50.3
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 3.1e-25 119.0 143 50.3
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.2e-24 117.1 144 48.6
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 1.2e-24 117.1 143 49.7
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 4.4e-24 115.2 144 50.0
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 5.8e-24 114.8 144 49.3
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 7.5e-24 114.4 142 50.7
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 9.8e-24 114.0 144 49.3
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.7e-23 113.2 149 49.7
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 2.2e-23 112.8 143 46.9
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 3.7e-23 112.1 144 49.3
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 3.7e-23 112.1 144 45.8
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.4e-22 110.2 151 49.7
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.2e-22 109.0 149 49.0
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 5.4e-22 108.2 141 46.1
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 7.0e-22 107.8 154 49.4
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 7.0e-22 107.8 142 50.7
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 1.2e-21 107.1 146 48.6
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.6e-21 106.7 139 46.8
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.6e-21 106.7 141 49.6
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 2.7e-21 105.9 149 48.3
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 4.6e-21 105.1 144 47.2
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 6.0e-21 104.8 142 46.5
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 3.0e-20 102.4 125 50.4
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 8.6e-20 100.9 144 46.5
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 2.5e-19 99.4 144 41.7
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 3.3e-19 99.0 144 44.4
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 5.6e-19 98.2 150 44.0
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 9.5e-19 97.4 150 42.7
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 2.3e-17 92.8 128 50.8
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 4.0e-17 92.0 150 41.3
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 6.8e-17 91.3 141 44.0
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 1.2e-16 90.5 138 41.3
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 7.5e-16 87.8 106 49.1
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 4.1e-14 82.0 108 49.1
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 5.4e-14 81.6 121 43.8
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 1.2e-13 80.5 104 47.1
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 4.6e-13 78.6 131 43.5
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 4.6e-13 78.6 142 39.4
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 3.0e-12 75.9 100 44.0
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 6.6e-12 74.7 107 43.9
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.1e-11 73.9 104 46.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.1e-11 73.9 152 39.5
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 5.6e-11 71.6 128 41.4
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 7.3e-11 71.2 105 43.8
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.8e-09 66.6 102 41.2
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-09 66.2 76 48.7
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.0e-08 63.2 83 48.2
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 2.6e-08 62.8 146 34.2
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 2.6e-08 62.8 135 36.3
Phvul.008G099800 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 3.4e-08 62.4 136 36.0
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 3.4e-08 62.4 100 38.0
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.9e-07 59.3 73 46.6
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 3.8e-07 58.9 132 32.6
Sed0011659 Sechium edule HOM05D003527 ORTHO05D004099 4.9e-07 58.5 74 48.6
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 1.4e-06 57.0 139 35.3
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 2.4e-06 56.2 129 37.2
FAN21G2526 Fragaria x ananassa HOM05D003527 ORTHO05D004099 3.2e-06 55.8 81 46.9
Glyma.08G358400 Glycine max HOM05D003527 ORTHO05D004099 3.2e-06 55.8 135 34.1
FAN16G0579 Fragaria x ananassa HOM05D003527 ORTHO05D004099 4.2e-06 55.5 76 47.4
FAN25G2547 Fragaria x ananassa HOM05D003527 ORTHO05D004099 4.2e-06 55.5 76 47.4
CsaV3_3G034940 Cucumis sativus L. HOM05D003527 ORTHO05D004099 5.4e-06 55.1 137 35.8
FAN11G1093 Fragaria x ananassa HOM05D003527 ORTHO05D004099 7.1e-06 54.7 78 44.9
arahy.Tifrunner.gnm1.ann1.QWF1SC Arachis hypogaea HOM05D003527 ORTHO05D004099 9.2e-06 54.3 72 43.1


User provided reference genes

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