Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0568 Fragaria x ananassa HOM05D003177 ORTHO05D003481 5.6e-26 120.2 60 100.0
FvH4_3g42340 Fragaria vesca HOM05D003177 ORTHO05D003481 7.3e-10 66.6 55 65.5
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.6e-09 64.3 55 63.6
FvH4_3g42560 Fragaria vesca HOM05D003177 ORTHO05D003481 4.7e-09 63.9 55 63.6
FvH4_3g43110 Fragaria vesca HOM05D003177 ORTHO05D003481 8.1e-09 63.2 55 63.6
FvH4_3g43180 Fragaria vesca HOM05D003177 ORTHO05D003481 8.1e-09 63.2 55 63.6
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 1.1e-08 62.8 57 56.1
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.1e-08 62.8 55 61.8
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.3e-08 61.6 55 61.8
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 3.1e-08 61.2 55 61.8
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 3.1e-08 61.2 55 60.0
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 4.0e-08 60.8 55 60.0
FAN10G2257 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.0e-08 60.8 55 60.0
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.0e-08 60.8 55 60.0
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.0e-08 60.8 55 60.0
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 1.2e-07 59.3 54 59.3
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.2e-07 59.3 55 58.2
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 1.5e-07 58.9 55 56.4
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 2.0e-07 58.5 54 57.4
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 2.6e-07 58.2 54 55.6
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 3.4e-07 57.8 54 57.4
Cpa.g.sc97.68 Carica papaya HOM05D003177 ORTHO05D003481 3.4e-07 57.8 57 54.4
Sed0011296 Sechium edule HOM05D003177 ORTHO05D003481 3.4e-07 57.8 57 57.9
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 4.4e-07 57.4 54 57.4
MELO3C018128.2 Cucumis melo HOM05D003177 ORTHO05D003481 4.4e-07 57.4 57 54.4
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 5.8e-07 57.0 55 56.4
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 7.6e-07 56.6 57 54.4
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 9.9e-07 56.2 54 57.4
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 9.9e-07 56.2 55 56.4
Prupe.4G202300 Prunus persica HOM05D003177 ORTHO05D003481 1.3e-06 55.8 57 54.4
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 1.7e-06 55.5 57 54.4
ClCG05G014770 Citrullus lanatus HOM05D003177 ORTHO05D003481 2.2e-06 55.1 57 56.1
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 2.2e-06 55.1 57 52.6
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 2.9e-06 54.7 54 55.6
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 2.9e-06 54.7 54 55.6
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 2.9e-06 54.7 54 55.6
FAN11G0113 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.7e-06 54.3 46 71.7
FAN28G1104 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.7e-06 54.3 46 71.7
MD03G1211600 Malus domestica HOM05D003177 ORTHO05D003481 3.7e-06 54.3 55 52.7
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 4.9e-06 53.9 57 50.9
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 4.9e-06 53.9 55 54.5
CsaV3_3G022860 Cucumis sativus L. HOM05D003177 ORTHO05D003481 6.4e-06 53.5 57 52.6
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 8.4e-06 53.1 62 50.0


User provided reference genes

Program Settings