Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0182 Fragaria x ananassa HOM05D007741 ORTHO05D016318 1.6e-73 279.3 136 100.0
RcHm_v2.0_Chr4g0423141 Rosa chinensis HOM05D007741 ORTHO05D016318 3.9e-35 151.8 180 52.8
RcHm_v2.0_Chr1g0346381 Rosa chinensis HOM05D007741 ORTHO05D016318 5.1e-35 151.4 180 52.8
RcHm_v2.0_Chr1g0339901 Rosa chinensis HOM05D007741 ORTHO05D016318 8.4e-30 134.0 169 50.3
RcHm_v2.0_Chr2g0119361 Rosa chinensis HOM05D007741 ORTHO05D016318 8.4e-30 134.0 169 50.3
RcHm_v2.0_Chr6g0279711 Rosa chinensis HOM05D007741 ORTHO05D016318 1.9e-29 132.9 131 58.8
RcHm_v2.0_Chr7g0204591 Rosa chinensis HOM05D007741 ORTHO05D016318 1.8e-24 116.3 112 59.8
FAN15G3031 Fragaria x ananassa HOM05D007741 ORTHO05D014215 2.7e-20 102.4 153 46.4
FAN12G2273 Fragaria x ananassa HOM05D007741 ORTHO05D209008 3.0e-19 99.0 151 44.4
FAN18G4008 Fragaria x ananassa HOM05D007741 ORTHO05D200570 3.0e-19 99.0 101 60.4
FAN27G3337 Fragaria x ananassa HOM05D007741 ORTHO05D016314 3.9e-19 98.6 106 55.7
FAN13G2213 Fragaria x ananassa HOM05D007741 ORTHO05D208410 5.1e-19 98.2 100 58.0
FAN24G0121 Fragaria x ananassa HOM05D007741 ORTHO05D208107 6.7e-19 97.8 95 58.9
FAN11G1680 Fragaria x ananassa HOM05D007741 ORTHO05D204100 1.1e-18 97.1 159 46.5
FAN22G0864 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.1e-18 97.1 144 46.5
RcHm_v2.0_Chr4g0422751 Rosa chinensis HOM05D007741 ORTHO05D016318 6.3e-17 91.3 99 56.6
FAN05G2149 Fragaria x ananassa HOM05D007741 ORTHO05D016318 1.2e-15 87.0 54 79.6
FvH4_6g29890 Fragaria vesca HOM05D007741 ORTHO05D014215 1.5e-15 86.7 93 57.0
RcHm_v2.0_Chr5g0050261 Rosa chinensis HOM05D007741 ORTHO05D014215 5.9e-15 84.7 145 42.1
RcHm_v2.0_Chr1g0320181 Rosa chinensis HOM05D028330 ORTHO05D341788 1.0e-14 84.0 103 48.5
FAN06G3290 Fragaria x ananassa HOM05D007741 ORTHO05D203466 2.2e-14 82.8 161 41.0
FAN22G0676 Fragaria x ananassa HOM05D007741 ORTHO05D204708 2.2e-14 82.8 94 55.3
FAN22G2406 Fragaria x ananassa HOM05D007741 ORTHO05D210186 2.2e-14 82.8 94 55.3
FAN12G3907 Fragaria x ananassa HOM05D022609 ORTHO05D029410 8.5e-14 80.9 77 62.3
RcHm_v2.0_Chr1g0351211 Rosa chinensis HOM05D007741 ORTHO05D015647 8.5e-14 80.9 133 45.9
FAN22G1765 Fragaria x ananassa HOM05D007741 ORTHO05D016314 1.9e-13 79.7 106 46.2
FAN08G0049 Fragaria x ananassa HOM05D007741 ORTHO05D210836 4.2e-13 78.6 72 58.3
FAN17G2775 Fragaria x ananassa HOM05D007741 ORTHO05D206244 7.2e-13 77.8 72 61.1
FAN21G0226 Fragaria x ananassa HOM05D007741 ORTHO05D208582 7.2e-13 77.8 116 45.7
RcHm_v2.0_Chr1g0358041 Rosa chinensis HOM05D007741 ORTHO05D347005 7.2e-13 77.8 104 49.0
FAN02G2687 Fragaria x ananassa HOM05D007741 ORTHO05D211123 6.1e-12 74.7 134 41.8
FAN20G2857 Fragaria x ananassa HOM05D017632 ORTHO05D029434 7.9e-12 74.3 59 64.4
FAN15G0652 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.0e-11 73.9 108 49.1
FAN19G0161 Fragaria x ananassa HOM05D007741 ORTHO05D204998 1.0e-11 73.9 136 44.9
FvH4_5g00140 Fragaria vesca HOM05D007761 ORTHO05D015647 1.4e-11 73.6 139 37.4
RcHm_v2.0_Chr1g0367541 Rosa chinensis HOM05D007741 ORTHO05D011083 1.4e-11 73.6 104 48.1
FAN10G2132 Fragaria x ananassa HOM05D007741 ORTHO05D204785 1.8e-11 73.2 81 49.4
FAN15G0375 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.8e-11 73.2 73 57.5
FAN04G0311 Fragaria x ananassa HOM05D007741 ORTHO05D209742 2.3e-11 72.8 147 37.4
RcHm_v2.0_Chr2g0151251 Rosa chinensis HOM05D005636 ORTHO05D006912 6.7e-11 71.2 127 40.9
RcHm_v2.0_Chr4g0427731 Rosa chinensis HOM05D007741 ORTHO05D006912 6.7e-11 71.2 131 41.2
RcHm_v2.0_Chr6g0295101 Rosa chinensis HOM05D007741 ORTHO05D035834 6.7e-11 71.2 133 42.1
RcHm_v2.0_Chr3g0465101 Rosa chinensis HOM05D007741 ORTHO05D342996 8.8e-11 70.9 201 34.3
FAN17G1839 Fragaria x ananassa HOM05D010166 ORTHO05D204969 1.1e-10 70.5 84 54.8
FAN10G3035 Fragaria x ananassa HOM05D010166 ORTHO05D207531 1.5e-10 70.1 100 50.0
FAN21G2484 Fragaria x ananassa HOM05D007741 ORTHO05D014215 2.0e-10 69.7 115 42.6
FAN25G2115 Fragaria x ananassa HOM05D007741 ORTHO05D014215 2.0e-10 69.7 89 49.4
FAN06G2936 Fragaria x ananassa HOM05D007741 ORTHO05D203393 2.6e-10 69.3 101 47.5
FAN10G2127 Fragaria x ananassa HOM05D022609 ORTHO05D029410 4.4e-10 68.6 76 52.6
FAN11G3088 Fragaria x ananassa HOM05D010166 ORTHO05D210407 4.4e-10 68.6 84 52.4
FAN26G3015 Fragaria x ananassa HOM05D007741 ORTHO05D199990 4.4e-10 68.6 109 41.3
FAN28G2015 Fragaria x ananassa HOM05D010166 ORTHO05D205652 5.7e-10 68.2 84 51.2
FAN18G4494 Fragaria x ananassa HOM05D010166 ORTHO05D209891 1.7e-09 66.6 59 61.0
RcHm_v2.0_Chr1g0319561 Rosa chinensis HOM05D007741 ORTHO05D342843 1.7e-09 66.6 65 56.9
FAN27G1253 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.7e-09 65.5 132 37.1
FAN13G1293 Fragaria x ananassa HOM05D007741 ORTHO05D203552 8.2e-09 64.3 53 66.0
FAN11G1752 Fragaria x ananassa HOM05D007741 ORTHO05D204122 1.1e-08 63.9 121 38.8
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.4e-08 63.5 51 64.7
FAN07G0379 Fragaria x ananassa HOM05D040498 ORTHO05D035315 1.8e-08 63.2 69 53.6
FAN12G3955 Fragaria x ananassa HOM05D007761 ORTHO05D015647 2.4e-08 62.8 137 36.5
FAN14G3085 Fragaria x ananassa HOM05D007741 ORTHO05D201723 3.1e-08 62.4 154 35.1
FAN05G2747 Fragaria x ananassa HOM05D015953 ORTHO05D202276 4.1e-08 62.0 80 45.0
RcHm_v2.0_Chr2g0140171 Rosa chinensis HOM05D007741 ORTHO05D015647 4.1e-08 62.0 104 49.0
FAN19G1218 Fragaria x ananassa HOM05D007741 ORTHO05D035834 5.3e-08 61.6 93 43.0
FvH4_2g30030 Fragaria vesca HOM05D017632 ORTHO05D029434 7.0e-08 61.2 50 60.0
FAN23G1385 Fragaria x ananassa HOM05D015953 ORTHO05D019200 7.0e-08 61.2 80 46.2
FAN07G1281 Fragaria x ananassa HOM05D007741 ORTHO05D016318 9.1e-08 60.8 49 63.3
RcHm_v2.0_Chr3g0459951 Rosa chinensis HOM05D007741 ORTHO05D342834 9.1e-08 60.8 78 46.2
FAN12G2794 Fragaria x ananassa HOM05D007741 ORTHO05D210173 1.2e-07 60.5 65 53.8
FAN18G4536 Fragaria x ananassa HOM05D007761 ORTHO05D015647 1.2e-07 60.5 92 37.0
FAN05G3071 Fragaria x ananassa HOM05D007761 ORTHO05D209680 2.6e-07 59.3 49 57.1
RcHm_v2.0_Chr4g0405571 Rosa chinensis HOM05D007741 ORTHO05D343499 2.6e-07 59.3 60 55.0
RcHm_v2.0_Chr4g0442201 Rosa chinensis HOM05D028330 ORTHO05D342349 3.4e-07 58.9 126 37.3
FAN15G0259 Fragaria x ananassa HOM05D007741 ORTHO05D200480 4.5e-07 58.5 138 34.8
FAN16G1673 Fragaria x ananassa HOM05D007741 ORTHO05D035834 1.7e-06 56.6 99 38.4
FAN18G2821 Fragaria x ananassa HOM05D016572 ORTHO05D016314 2.2e-06 56.2 31 77.4
FAN24G3283 Fragaria x ananassa HOM05D007741 ORTHO05D201185 2.2e-06 56.2 63 52.4
FAN04G2165 Fragaria x ananassa HOM05D007741 ORTHO05D205226 5.0e-06 55.1 111 39.6
FAN09G4565 Fragaria x ananassa HOM05D007761 ORTHO05D015647 5.0e-06 55.1 79 40.5
FAN25G1610 Fragaria x ananassa HOM05D007761 ORTHO05D011461 5.0e-06 55.1 116 32.8
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 6.5e-06 54.7 159 31.4
FAN01G0683 Fragaria x ananassa HOM05D007761 ORTHO05D011461 8.5e-06 54.3 140 30.7
FAN09G2793 Fragaria x ananassa HOM05D007741 ORTHO05D204231 8.5e-06 54.3 75 42.7
FAN10G3275 Fragaria x ananassa HOM05D007761 ORTHO05D011461 8.5e-06 54.3 138 30.4
FAN12G0192 Fragaria x ananassa HOM05D007761 ORTHO05D011461 8.5e-06 54.3 140 30.7


User provided reference genes

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