Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.7e-158 560.8 278 100.0
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 1.6e-155 552.7 278 98.6
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.9e-155 550.8 278 97.8
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.0e-154 550.1 278 97.5
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 3.6e-136 488.4 280 88.9
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.6e-120 436.4 259 84.9
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 9.2e-116 420.6 277 74.7
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 3.5e-115 418.7 279 74.9
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 3.0e-114 415.6 279 74.9
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 2.5e-113 412.5 277 72.9
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 7.3e-113 411.0 279 73.8
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 8.1e-112 407.5 279 72.4
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 1.8e-111 406.4 279 72.0
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 1.2e-110 403.7 278 71.2
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 3.4e-110 402.1 278 71.6
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 4.2e-108 395.2 284 71.1
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 7.1e-108 394.4 277 68.6
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 9.2e-108 394.0 276 71.0
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.2e-107 393.7 277 68.6
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 1.6e-107 393.3 277 70.4
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 1.6e-107 393.3 280 69.3
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 1.6e-107 393.3 277 71.1
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 2.7e-107 392.5 281 69.8
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 4.6e-107 391.7 281 69.0
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 4.6e-107 391.7 277 68.2
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 6.0e-107 391.3 277 67.5
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 7.8e-107 391.0 277 68.2
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 1.3e-106 390.2 278 70.1
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 1.3e-106 390.2 276 70.3
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 2.3e-106 389.4 280 69.3
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.9e-106 388.7 277 70.4
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 6.6e-106 387.9 277 69.7
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 1.5e-105 386.7 275 69.5
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 2.5e-105 386.0 280 69.3
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.3e-105 385.6 278 69.1
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 9.6e-105 384.0 277 69.7
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 9.6e-105 384.0 277 68.2
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 1.2e-104 383.6 276 68.8
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 1.2e-104 383.6 277 69.0
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.2e-104 383.6 277 69.7
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 1.6e-104 383.3 277 67.5
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 2.1e-104 382.9 278 69.1
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.1e-104 382.9 277 70.0
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 4.7e-104 381.7 277 68.6
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 4.7e-104 381.7 280 68.2
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 8.1e-104 380.9 277 68.2
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 8.1e-104 380.9 277 68.6
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 8.1e-104 380.9 278 68.7
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 1.4e-103 380.2 277 69.7
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 3.1e-103 379.0 276 68.5
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 6.9e-103 377.9 282 66.7
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 1.2e-102 377.1 277 65.7
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 2.0e-102 376.3 278 68.3
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 4.4e-102 375.2 280 67.5
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 4.4e-102 375.2 275 65.8
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 2.2e-101 372.9 277 68.2
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 2.9e-101 372.5 234 76.1
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 2.9e-101 372.5 276 65.9
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 3.8e-101 372.1 276 68.1
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 3.8e-101 372.1 275 65.8
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 4.9e-101 371.7 277 67.1
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 6.4e-101 371.3 280 66.8
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 6.4e-101 371.3 277 67.1
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.4e-100 369.4 284 65.5
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 3.2e-100 369.0 277 67.5
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 5.4e-100 368.2 279 65.6
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 9.3e-100 367.5 277 66.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.2e-99 367.1 277 67.1
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.1e-99 366.3 278 66.5
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 2.7e-99 365.9 277 66.1
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 4.6e-99 365.2 280 66.8
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 6.0e-99 364.8 241 73.0
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 1.3e-98 363.6 277 65.7
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 1.7e-98 363.2 274 66.1
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 2.3e-98 362.8 277 64.6
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 5.1e-98 361.7 277 65.3
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 6.6e-98 361.3 277 63.9
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 8.7e-98 360.9 276 66.3
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 1.5e-97 360.1 277 65.0
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-97 359.8 271 64.9
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-97 359.8 271 64.9
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 1.9e-97 359.8 276 65.6
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 1.9e-97 359.8 277 65.7
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 1.9e-97 359.8 274 65.7
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 3.3e-97 359.0 282 62.1
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 3.3e-97 359.0 283 61.8
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.3e-96 357.1 277 65.0
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 1.6e-96 356.7 277 64.3
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 2.8e-96 355.9 277 63.9
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 2.8e-96 355.9 281 64.1
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 3.6e-96 355.5 280 62.1
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 4.8e-96 355.1 283 61.5
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 4.8e-96 355.1 276 63.8
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 8.1e-96 354.4 283 62.5
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 1.8e-95 353.2 285 62.1
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 1.8e-95 353.2 285 62.1
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 1.8e-95 353.2 277 64.6
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 2.4e-95 352.8 278 64.0
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 6.9e-95 351.3 283 60.8
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 9.0e-95 350.9 285 62.5
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 1.5e-94 350.1 285 61.8
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 1.5e-94 350.1 285 61.8
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 2.0e-94 349.7 296 60.5
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 2.0e-94 349.7 283 62.2
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 2.6e-94 349.4 283 62.5
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 3.4e-94 349.0 282 62.1
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 3.4e-94 349.0 283 60.8
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 4.5e-94 348.6 284 62.0
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 5.8e-94 348.2 278 61.2
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 7.6e-94 347.8 282 62.1
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 7.6e-94 347.8 276 63.4
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 1.3e-93 347.1 284 60.6
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 1.3e-93 347.1 284 60.6
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 1.3e-93 347.1 282 61.7
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 1.3e-93 347.1 283 61.8
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 1.7e-93 346.7 279 61.3
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 2.9e-93 345.9 283 61.5
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.8e-93 345.5 284 60.9
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 3.8e-93 345.5 282 61.3
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.1e-92 344.0 284 61.3
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 1.1e-92 344.0 283 61.5
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 1.4e-92 343.6 283 61.1
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.4e-92 343.6 284 60.2
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 1.4e-92 343.6 283 61.1
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.4e-92 343.6 284 58.5
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 2.4e-92 342.8 231 70.1
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 7.1e-92 341.3 237 71.3
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 1.6e-91 340.1 276 61.6
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 2.7e-91 339.3 273 62.3
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 3.5e-91 339.0 308 57.1
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 3.5e-91 339.0 276 61.2
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 3.5e-91 339.0 282 61.0
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 6.0e-91 338.2 277 61.0
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 1.3e-90 337.0 279 59.9
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 6.7e-90 334.7 277 62.1
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 2.5e-89 332.8 277 61.7
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 5.6e-89 331.6 283 60.1
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 5.3e-87 325.1 235 66.4
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 1.8e-82 310.1 278 57.9
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 2.3e-82 309.7 277 54.9
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.5e-81 306.2 277 58.5
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 3.7e-80 302.4 277 58.1
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 2.5e-76 289.7 281 53.7
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 7.1e-76 288.1 285 50.9
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.2e-75 287.3 182 74.2
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 3.9e-74 282.3 250 58.8
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 2.2e-72 276.6 238 57.6
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.8e-72 276.2 224 58.9
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 5.3e-71 271.9 196 65.3
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 2.8e-64 249.6 287 44.9
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 8.2e-64 248.1 230 53.9
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 2.9e-61 239.6 237 48.5
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 4.2e-60 235.7 184 61.4
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 8.2e-56 221.5 160 67.5
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.2e-54 217.6 188 60.6
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 5.9e-54 215.3 284 41.5
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 7.2e-52 208.4 161 64.0
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 2.2e-48 196.8 160 63.8
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 6.5e-45 185.3 236 40.7
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 8.5e-45 184.9 225 46.2
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 5.5e-44 182.2 207 44.9
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-42 177.6 179 55.3
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 2.5e-36 156.8 136 61.0
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 9.4e-36 154.8 136 60.3
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 9.4e-36 154.8 136 60.3
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 2.1e-27 127.1 116 59.5
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-23 112.1 121 43.0
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.5e-17 94.4 75 58.7
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.0e-17 94.0 187 38.0
Actinidia37164 Actinidia chinensis HOM05D004171 ORTHO05D057920 7.8e-06 55.5 50 44.0


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