Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 1.9e-106 389.4 228 100.0
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 1.9e-106 389.4 228 100.0
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.9e-95 352.8 227 90.3
FAN25G3202 Fragaria x ananassa HOM05D010293 ORTHO05D009871 4.0e-48 195.7 148 73.6
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 4.7e-33 145.6 237 40.1
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 1.1e-29 134.4 148 48.6
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 1.4e-29 134.0 248 38.3
RcHm_v2.0_Chr5g0035271 Rosa chinensis HOM05D010293 ORTHO05D009871 1.1e-26 124.4 201 50.2
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 5.6e-26 122.1 147 49.0
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 7.3e-26 121.7 233 37.3
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 2.1e-25 120.2 147 49.0
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 4.4e-23 112.5 235 35.3
FAN25G1744 Fragaria x ananassa HOM05D010293 ORTHO05D009871 9.8e-23 111.3 90 83.3
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 3.2e-21 106.3 244 34.8
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 3.6e-17 92.8 231 33.3
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 3.6e-17 92.8 225 32.4
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 6.2e-17 92.0 237 32.9
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 2.6e-15 86.7 327 27.2
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 9.8e-15 84.7 184 34.2
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 2.2e-14 83.6 122 40.2
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 2.2e-14 83.6 240 28.3
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 8.3e-14 81.6 230 30.9
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.1e-13 81.3 223 30.5
RcHm_v2.0_Chr5g0035261 Rosa chinensis HOM05D010293 ORTHO05D009871 4.1e-13 79.3 84 52.4
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 2.7e-12 76.6 231 31.2
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 4.6e-12 75.9 235 28.1
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.5e-10 70.9 248 28.6
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.9e-10 70.5 157 34.4
MD11G1237800 Malus domestica HOM05D010293 ORTHO05D009871 4.3e-10 69.3 87 46.0
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 5.6e-10 68.9 107 40.2
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 9.5e-10 68.2 190 30.5
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.6e-09 67.4 248 27.8
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 2.1e-09 67.0 158 33.5
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 6.2e-09 65.5 237 27.8
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 2.3e-08 63.5 234 26.5
QL08p018535 Quercus lobata HOM05D010293 ORTHO05D009871 3.1e-08 63.2 128 32.8
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 5.2e-08 62.4 177 29.4
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 6.8e-08 62.0 161 31.1
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 2.2e-06 57.0 199 27.6
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.9e-06 56.6 236 27.1
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 8.4e-06 55.1 154 27.9


User provided reference genes

Program Settings