Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g35710 Fragaria vesca HOM05D008682 ORTHO05D010606 4.8e-45 184.1 92 100.0
FAN11G0028 Fragaria x ananassa HOM05D008682 ORTHO05D010606 4.8e-45 184.1 92 100.0
FAN16G2515 Fragaria x ananassa HOM05D008682 ORTHO05D010606 1.4e-44 182.6 92 98.9
FAN21G0255 Fragaria x ananassa HOM05D008682 ORTHO05D010606 2.4e-44 181.8 92 97.8
FAN25G1136 Fragaria x ananassa HOM05D008682 ORTHO05D010606 5.3e-44 180.6 92 97.8
RcHm_v2.0_Chr5g0063861 Rosa chinensis HOM05D008682 ORTHO05D010606 4.5e-35 151.0 92 83.7
MD11G1111900 Malus domestica HOM05D008682 ORTHO05D010606 8.3e-21 103.6 90 62.2
QL01p032659 Quercus lobata HOM05D008682 ORTHO05D010606 3.5e-19 98.2 91 57.1
Thecc.09G324500 Theobroma cacao HOM05D008682 ORTHO05D010606 6.1e-16 87.4 85 60.0
Dinv01576 Davidia involucrata HOM05D008682 ORTHO05D010606 8.0e-16 87.0 83 61.4
Duzib150G1588 Durio zibethinus HOM05D008682 ORTHO05D010606 2.6e-14 82.0 91 57.1
Prupe.6G080300 Prunus persica HOM05D008682 ORTHO05D010606 1.7e-13 79.3 65 66.2
COL.COLO4_18484 Corchorus olitorius HOM05D008682 ORTHO05D010606 1.4e-12 76.3 85 55.3
CiPaw.13G096700 Carya illinoinensis HOM05D008682 ORTHO05D010606 7.0e-12 73.9 81 54.3
Haze_24065 Corylus avellana HOM05D008682 ORTHO05D010606 2.0e-11 72.4 94 52.1
Potri.001G237700 Populus trichocarpa HOM05D008682 ORTHO05D010606 3.5e-11 71.6 93 46.2
CiPaw.14G070300 Carya illinoinensis HOM05D008682 ORTHO05D010606 8.6e-10 67.0 89 44.9
Hma1.2p1_0035F.1_g022220 Hydrangea macrophylla HOM05D008682 ORTHO05D010606 1.1e-09 66.6 57 64.9
Phvul.011G065200 Phaseolus vulgaris HOM05D008682 ORTHO05D010606 1.1e-09 66.6 83 49.4
CANSAT54G1244 Cannabis sativa HOM05D008682 ORTHO05D010606 1.9e-09 65.9 79 48.1
TPR.G14487 Trifolium pratense HOM05D008682 ORTHO05D010606 5.6e-09 64.3 83 43.4
Manes.11G132000 Manihot esculenta HOM05D008682 ORTHO05D010606 7.3e-09 63.9 93 45.2
Lj3g0003361 Lotus japonicus HOM05D008682 ORTHO05D010606 1.2e-08 63.2 87 44.8
Cc01_g12650 Coffea canephora HOM05D008682 ORTHO05D010606 2.8e-08 62.0 78 46.2
Oeu017378.1 Olea europaea HOM05D008682 ORTHO05D010606 2.8e-08 62.0 85 45.9
Glyma.11G140700 Glycine max HOM05D008682 ORTHO05D010606 3.6e-08 61.6 84 42.9
Gohir.A05G096800 Gossypium hirsutum HOM05D008682 ORTHO05D010606 4.7e-08 61.2 85 48.2
Glyma.12G064200 Glycine max HOM05D008682 ORTHO05D010606 6.1e-08 60.8 85 47.1
Potri.009G029000 Populus trichocarpa HOM05D008682 ORTHO05D010606 1.0e-07 60.1 93 47.3
ECA248G1380 Erigeron canadensis HOM05D035893 ORTHO05D035138 6.8e-07 57.4 85 43.5
Oeu012682.1 Olea europaea HOM05D025361 ORTHO05D010606 2.6e-06 55.5 90 42.2
GSVIVG01016568001 Vitis vinifera HOM05D012970 ORTHO05D014304 5.7e-06 54.3 93 40.9
PGR119G0105 Punica granatum HOM05D059016 ORTHO05D010606 7.5e-06 53.9 77 41.6


User provided reference genes

Program Settings