Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-208 729.2 355 100.0
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.2e-205 719.5 368 96.2
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.7e-189 664.5 368 89.9
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.0e-188 663.3 343 95.6
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.0e-173 610.5 363 85.7
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 4.0e-164 581.6 363 79.3
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 7.8e-144 514.2 378 68.3
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 8.1e-141 504.2 364 68.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.1e-125 451.1 270 86.3
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.7e-122 443.4 364 60.4
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 3.8e-122 442.2 363 61.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.9e-121 439.9 362 60.5
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 9.3e-121 437.6 363 60.1
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.7e-120 436.0 364 60.4
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.3e-119 433.0 364 58.8
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 3.9e-119 432.2 360 60.0
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 6.7e-119 431.4 371 58.2
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.3e-118 428.7 276 74.6
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 5.6e-118 428.3 359 61.0
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 7.4e-118 427.9 365 59.5
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 7.4e-118 427.9 364 59.1
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 6.2e-117 424.9 362 57.5
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.2e-117 424.5 360 59.4
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.8e-116 423.3 341 61.6
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 6.9e-116 421.4 361 58.4
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.5e-115 420.2 361 58.2
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-115 419.1 357 58.3
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-115 419.1 357 58.3
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.7e-114 416.8 360 58.3
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 3.8e-114 415.6 362 58.3
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 8.4e-114 414.5 342 59.4
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.1e-113 414.1 367 56.1
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.5e-113 412.9 351 58.7
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 4.2e-113 412.1 363 57.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 9.3e-113 411.0 370 55.9
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 6.1e-112 408.3 366 57.7
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 6.1e-112 408.3 367 55.6
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.3e-111 407.1 361 58.2
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.1e-110 404.1 367 55.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 1.5e-110 403.7 364 56.6
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.5e-110 403.7 361 56.2
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.3e-110 402.5 372 55.6
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 5.7e-110 401.7 367 55.0
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 4.8e-109 398.7 362 57.7
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 4.8e-109 398.7 361 56.8
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 8.2e-109 397.9 362 55.8
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.1e-108 397.5 361 56.8
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.8e-108 396.7 370 55.1
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 2.4e-108 396.4 337 60.2
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.1e-108 395.6 363 57.0
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 5.3e-108 395.2 344 57.3
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 6.9e-108 394.8 366 54.6
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.0e-107 393.3 363 55.9
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.6e-107 392.9 366 55.7
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.4e-107 392.5 363 55.6
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.0e-106 391.0 343 57.1
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 2.5e-105 386.3 364 54.7
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.7e-104 382.9 360 55.0
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 6.1e-104 381.7 363 53.4
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.0e-103 380.9 363 53.4
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.4e-103 380.6 363 54.8
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.5e-102 377.1 349 56.2
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.2e-101 373.2 363 55.1
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 8.2e-101 371.3 364 51.6
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.1e-100 370.9 364 53.3
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.1e-100 370.9 351 52.7
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 4.1e-100 369.0 379 49.6
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.2e-99 367.5 364 51.4
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 3.4e-99 365.9 362 51.9
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 4.5e-99 365.5 362 50.8
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 5.0e-98 362.1 363 53.4
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 6.5e-98 361.7 356 53.9
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.1e-97 360.9 361 50.1
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.1e-97 360.9 361 50.1
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.1e-97 360.9 362 50.6
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.5e-97 359.8 362 49.7
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 3.2e-97 359.4 362 50.0
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 4.7e-96 355.5 358 52.0
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.4e-95 354.0 332 57.8
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.8e-95 353.6 394 47.5
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.8e-95 353.6 360 50.6
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.5e-94 350.5 346 53.2
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 5.7e-94 348.6 361 51.8
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 1.3e-93 347.4 385 47.0
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 7.0e-92 341.7 334 54.5
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.7e-88 329.7 360 47.8
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 3.3e-86 322.8 358 50.3
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.7e-85 319.3 289 58.5
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 6.3e-85 318.5 361 46.8
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.0e-83 313.5 358 47.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 5.9e-83 312.0 342 48.0
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.9e-81 307.0 352 48.3
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 5.5e-81 305.4 361 49.0
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 9.4e-81 304.7 330 51.2
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.7e-77 292.7 282 55.7
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.3e-76 288.9 270 56.7
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.7e-75 286.6 312 51.0
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.8e-71 273.9 250 54.8
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.5e-70 270.8 282 51.8
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 8.3e-69 265.0 253 53.0
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 3.6e-64 249.6 233 51.1
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 4.7e-64 249.2 185 61.1
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 4.9e-61 239.2 232 56.5
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 9.2e-60 235.0 233 52.8
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 7.8e-59 231.9 242 53.7
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.1e-56 223.8 318 43.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 6.8e-55 218.8 370 38.1
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 9.2e-44 181.8 129 59.7
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.1e-39 168.3 130 60.8
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 1.3e-34 151.4 100 71.0
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 3.3e-25 120.2 313 32.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 7.3e-25 119.0 227 35.2
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 2.6e-22 110.5 144 44.4
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.1e-19 100.9 75 62.7
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 4.8e-16 89.7 69 60.9
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 3.1e-15 87.0 106 40.6
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 3.7e-08 63.5 82 45.1


User provided reference genes

Program Settings