Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4265 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.9e-101 371.3 171 100.0
FAN09G3980 Fragaria x ananassa HOM05D006059 ORTHO05D022634 4.2e-87 324.7 197 79.7
FAN03G3178 Fragaria x ananassa HOM05D006059 ORTHO05D022634 1.5e-84 316.2 205 76.1
FAN19G3119 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.4e-84 315.1 190 81.1
FvH4_6g48101 Fragaria vesca HOM05D006059 ORTHO05D198592 1.8e-82 309.3 187 79.7
FAN25G3073 Fragaria x ananassa HOM05D006059 ORTHO05D022634 9.8e-76 287.0 177 79.1
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 1.7e-75 286.2 298 52.7
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 5.2e-69 264.6 271 53.5
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 1.2e-57 226.9 252 50.0
FvH4_6g02080 Fragaria vesca HOM05D006059 ORTHO05D022634 1.1e-53 213.8 167 65.9
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.1e-47 193.7 92 97.8
FAN06G2872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-46 189.9 92 95.7
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-45 186.8 92 95.7
FAN27G2436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.2e-45 184.9 92 93.5
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 5.8e-36 154.8 162 56.2
FAN06G2094 Fragaria x ananassa HOM05D006059 ORTHO05D017966 2.2e-35 152.9 72 93.1
FAN16G2666 Fragaria x ananassa HOM05D025153 ORTHO05D017966 2.4e-34 149.4 70 94.3
FAN17G1384 Fragaria x ananassa HOM05D006059 ORTHO05D201010 1.2e-33 147.1 267 38.6
FAN24G2449 Fragaria x ananassa HOM05D006059 ORTHO05D207803 4.6e-33 145.2 66 98.5
FAN05G3551 Fragaria x ananassa HOM05D006059 ORTHO05D202697 5.1e-32 141.7 77 83.1
FAN08G3607 Fragaria x ananassa HOM05D006059 ORTHO05D211013 2.9e-27 125.9 59 96.6
FAN01G0206 Fragaria x ananassa HOM05D006059 ORTHO05D207853 3.8e-27 125.6 59 94.9
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 2.4e-26 122.9 90 70.0
FvH4_5g09320 Fragaria vesca HOM05D006059 ORTHO05D010613 5.4e-26 121.7 129 55.0
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-25 120.2 90 70.0
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 2.1e-25 119.8 90 70.0
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-25 119.8 90 70.0
FvH4_6g37922 Fragaria vesca HOM05D006059 ORTHO05D010613 4.6e-25 118.6 64 85.9
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.6e-25 118.6 90 68.9
FAN14G3214 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.6e-25 118.6 88 67.0
FAN01G0864 Fragaria x ananassa HOM05D006059 ORTHO05D019147 7.9e-25 117.9 90 67.8
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-24 117.1 89 68.5
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-24 116.7 90 68.9
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.0e-24 115.9 89 67.4
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.0e-24 115.9 89 68.5
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.9e-24 115.5 89 67.4
FAN03G0148 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.1e-24 115.2 90 67.8
FAN14G3910 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.1e-24 115.2 90 67.8
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.7e-24 114.8 90 67.8
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.7e-24 114.8 90 67.8
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.1e-23 114.0 90 67.8
FAN16G3677 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-23 113.2 88 67.0
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 2.5e-23 112.8 90 66.7
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-23 112.1 90 67.8
FAN12G1586 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.6e-23 110.9 90 66.7
FAN18G2895 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-21 106.7 85 67.1
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 1.2e-20 104.0 90 58.9
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 2.5e-18 96.3 99 49.5
FAN18G3497 Fragaria x ananassa HOM05D006059 ORTHO05D017966 1.2e-17 94.0 44 95.5
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 1.2e-17 94.0 167 38.3
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 1.2e-17 94.0 99 48.5
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.6e-17 92.0 79 63.3
FAN05G3510 Fragaria x ananassa HOM05D006059 ORTHO05D203405 1.0e-16 90.9 67 70.1
FvH4_5g36660 Fragaria vesca HOM05D006059 ORTHO05D010613 1.3e-16 90.5 79 64.6
FAN05G1577 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-16 90.5 79 64.6
FAN11G3819 Fragaria x ananassa HOM05D006059 ORTHO05D209325 1.3e-16 90.5 61 72.1
FAN13G1777 Fragaria x ananassa HOM05D006059 ORTHO05D201876 1.3e-16 90.5 210 31.4
FAN08G2764 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-16 90.1 79 64.6
FAN13G2711 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-16 90.1 79 64.6
FAN24G0852 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-16 90.1 78 64.1
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 1.8e-16 90.1 92 47.8
FAN05G4414 Fragaria x ananassa HOM05D006059 ORTHO05D200847 3.0e-16 89.4 150 39.3
FAN27G3382 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.7e-16 88.2 79 63.3
FAN11G2691 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.7e-16 87.8 90 56.7
FAN14G0222 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.7e-16 87.8 79 63.3
FAN05G3127 Fragaria x ananassa HOM05D006059 ORTHO05D208470 1.1e-15 87.4 77 62.3
FAN06G3448 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.5e-15 87.0 79 63.3
FAN09G4197 Fragaria x ananassa HOM05D006059 ORTHO05D210161 1.5e-15 87.0 50 78.0
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 87.0 88 53.4
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 2.5e-15 86.3 79 63.3
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 2.5e-15 86.3 71 66.2
FAN06G3209 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.3e-15 85.9 79 62.0
FAN25G2292 Fragaria x ananassa HOM05D023658 ORTHO05D017966 3.3e-15 85.9 64 67.2
FAN08G1991 Fragaria x ananassa HOM05D006059 ORTHO05D208958 4.3e-15 85.5 50 76.0
FAN10G0384 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.3e-15 85.5 79 62.0
FAN09G4425 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.6e-15 84.3 74 63.5
FAN10G1186 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-14 84.0 72 63.9
FAN06G3983 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-14 83.6 79 62.0
FAN11G0174 Fragaria x ananassa HOM05D023658 ORTHO05D017966 2.1e-14 83.2 66 62.1
FAN14G4965 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.8e-14 82.8 78 62.8
FAN02G0484 Fragaria x ananassa HOM05D006059 ORTHO05D207202 3.7e-14 82.4 50 76.0
FAN14G4872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.0e-13 77.8 79 59.5
FAN10G0957 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.0e-12 76.6 72 61.1
FAN05G2589 Fragaria x ananassa HOM05D000079 ORTHO05D000211 5.8e-12 75.1 47 76.6
FAN07G2379 Fragaria x ananassa HOM05D006059 ORTHO05D019147 5.8e-12 75.1 77 54.5
FAN03G1768 Fragaria x ananassa HOM05D006059 ORTHO05D207149 7.6e-12 74.7 158 33.5
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.6e-12 74.7 89 50.6
FAN12G1091 Fragaria x ananassa HOM05D006059 ORTHO05D017966 1.0e-11 74.3 52 71.2
FAN06G3136 Fragaria x ananassa HOM05D006059 ORTHO05D202002 2.2e-11 73.2 121 40.5
FAN06G1974 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.4e-11 71.2 54 66.7
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 8.4e-11 71.2 81 50.6
FAN28G0623 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-10 69.7 59 66.1
FAN04G2861 Fragaria x ananassa HOM05D006059 ORTHO05D210609 3.2e-10 69.3 45 71.1
FAN10G1069 Fragaria x ananassa HOM05D033044 ORTHO05D207370 7.9e-09 64.7 50 64.0
FAN02G1039 Fragaria x ananassa HOM05D006059 ORTHO05D210069 3.0e-08 62.8 73 52.1
FAN06G1279 Fragaria x ananassa HOM05D033044 ORTHO05D200869 8.7e-08 61.2 45 64.4
FAN26G1598 Fragaria x ananassa HOM05D006059 ORTHO05D203524 8.7e-08 61.2 45 64.4
FAN05G0105 Fragaria x ananassa HOM05D006059 ORTHO05D204564 1.1e-07 60.8 46 60.9
FAN24G1658 Fragaria x ananassa HOM05D006059 ORTHO05D209653 1.1e-07 60.8 47 61.7
FAN21G0235 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-06 57.0 38 71.1


User provided reference genes

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