Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4259 Fragaria x ananassa HOM05D017399 ORTHO05D020730 3.2e-98 361.7 175 100.0
FAN10G2628 Fragaria x ananassa HOM05D017399 ORTHO05D020730 3.7e-94 348.2 175 97.1
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 1.8e-48 196.4 187 57.2
FAN03G0661 Fragaria x ananassa HOM05D017399 ORTHO05D020730 2.2e-46 189.5 117 81.2
FAN06G0592 Fragaria x ananassa HOM05D017399 ORTHO05D020730 3.8e-43 178.7 88 94.3
FvH4_7g11070 Fragaria vesca HOM05D017399 ORTHO05D020730 9.8e-39 164.1 142 64.8
FvH4_5g17590 Fragaria vesca HOM05D017399 ORTHO05D045498 1.0e-35 154.1 156 55.1
FAN18G1639 Fragaria x ananassa HOM05D017399 ORTHO05D045498 5.4e-29 131.7 73 82.2
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 3.1e-24 115.9 222 36.0
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.3e-22 110.5 215 36.7
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 1.7e-22 110.2 215 36.7
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 3.2e-21 105.9 216 36.1
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 5.4e-21 105.1 189 38.1
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.2e-20 104.0 220 33.6
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 6.0e-20 101.7 220 33.6
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 6.0e-20 101.7 220 33.6
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.7e-19 100.1 218 36.2
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.7e-19 100.1 218 36.2
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.7e-19 100.1 189 37.6
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.3e-19 99.8 220 32.7
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 5.1e-19 98.6 179 36.3
FAN01G1856 Fragaria x ananassa HOM05D002759 ORTHO05D020730 3.3e-18 95.9 93 59.1
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 3.3e-18 95.9 221 33.0
FAN06G2218 Fragaria x ananassa HOM05D017399 ORTHO05D210720 4.3e-18 95.5 80 63.8
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 4.3e-18 95.5 189 37.0
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 5.6e-18 95.1 187 33.7
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 5.6e-18 95.1 206 33.0
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 2.1e-17 93.2 186 37.1
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 3.6e-17 92.4 178 36.5
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 1.4e-16 90.5 214 33.2
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 2.3e-16 89.7 219 32.0
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 4.0e-16 89.0 182 34.6
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 6.8e-16 88.2 189 34.9
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 6.8e-16 88.2 189 34.9
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 8.9e-16 87.8 185 32.4
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 8.9e-16 87.8 185 32.4
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 8.9e-16 87.8 185 32.4
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 8.9e-16 87.8 186 31.7
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-15 87.4 185 32.4
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.2e-15 87.4 213 32.4
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.5e-15 87.0 180 31.7
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.6e-15 86.3 216 30.6
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 3.4e-15 85.9 169 34.3
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 3.4e-15 85.9 186 31.2
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 3.4e-15 85.9 186 31.7
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 4.4e-15 85.5 189 34.4
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 4.4e-15 85.5 156 37.8
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 5.8e-15 85.1 189 32.8
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 5.8e-15 85.1 211 30.8
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 9.9e-15 84.3 186 30.1
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 9.9e-15 84.3 198 31.3
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 9.9e-15 84.3 183 32.2
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 1.3e-14 84.0 187 34.2
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.7e-14 83.6 216 29.6
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.7e-14 83.6 186 31.2
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 2.2e-14 83.2 217 30.9
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 2.9e-14 82.8 178 32.6
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 3.7e-14 82.4 186 29.0
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.7e-14 82.4 142 35.2
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 4.9e-14 82.0 188 34.6
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 4.9e-14 82.0 187 33.7
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 6.4e-14 81.6 188 34.0
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 1.4e-13 80.5 185 28.6
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 2.4e-13 79.7 139 36.7
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 3.2e-13 79.3 185 29.2
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 3.2e-13 79.3 188 34.6
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 9.2e-13 77.8 205 30.2
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.2e-12 77.4 183 28.4
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 1.2e-12 77.4 214 31.3
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 2.7e-12 76.3 219 30.6
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 3.5e-12 75.9 206 28.6
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 1.0e-11 74.3 189 28.0
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.3e-11 73.9 141 35.5
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.7e-11 73.6 186 30.1
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 1.7e-11 73.6 189 29.6
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 2.3e-11 73.2 223 27.4
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.3e-11 73.2 187 33.7
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.3e-11 73.2 187 33.7
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 3.0e-11 72.8 189 32.8
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 5.1e-11 72.0 186 30.6
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 6.6e-11 71.6 215 30.2
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 8.6e-11 71.2 201 30.3
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 8.6e-11 71.2 189 29.1
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.1e-10 70.9 178 30.3
Gohir.A01G176601 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.1e-10 70.9 143 37.1
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.5e-10 70.5 185 31.4
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.5e-10 70.5 187 29.4
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.3e-10 69.3 185 28.6
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 5.6e-10 68.6 185 28.6
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 5.6e-10 68.6 184 27.2
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 7.3e-10 68.2 137 31.4
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 9.6e-10 67.8 213 27.7
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.2e-09 67.4 179 32.4
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.6e-09 67.0 189 28.6
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 2.8e-09 66.2 136 33.8
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.6e-09 65.9 187 30.5
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.1e-08 64.3 202 28.2
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 6.8e-08 61.6 143 29.4
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 6.8e-08 61.6 186 27.4
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 8.9e-08 61.2 187 27.8
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 3.4e-07 59.3 195 29.2
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 3.4e-07 59.3 186 24.2
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 4.4e-07 58.9 136 31.6
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 5.8e-07 58.5 188 28.2
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 1.3e-06 57.4 138 31.9
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 1.3e-06 57.4 138 31.9
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.7e-06 57.0 187 28.3
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 2.9e-06 56.2 141 29.8


User provided reference genes

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