Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4203 Fragaria x ananassa HOM05D001739 ORTHO05D029616 0.0e+00 1123.6 582 100.0
RcHm_v2.0_Chr2g0094991 Rosa chinensis HOM05D001739 ORTHO05D029616 1.7e-228 796.2 598 71.4
RcHm_v2.0_Chr2g0095061 Rosa chinensis HOM05D001739 ORTHO05D029616 2.5e-224 782.3 598 70.9
RcHm_v2.0_Chr2g0095131 Rosa chinensis HOM05D001739 ORTHO05D015654 4.1e-126 456.1 595 47.2
FvH4_7g02570 Fragaria vesca HOM05D001739 ORTHO05D029616 1.2e-122 444.5 271 88.2
FAN26G3315 Fragaria x ananassa HOM05D001739 ORTHO05D025407 2.4e-118 430.3 608 46.7
FvH4_1g08660 Fragaria vesca HOM05D001739 ORTHO05D025407 1.3e-116 424.5 610 46.2
FAN26G0106 Fragaria x ananassa HOM05D001739 ORTHO05D015654 3.1e-113 413.3 601 45.8
FAN19G2992 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.6e-112 410.2 607 44.8
FvH4_1g08691 Fragaria vesca HOM05D001739 ORTHO05D015654 4.5e-112 409.5 606 44.9
FvH4_1g08730 Fragaria vesca HOM05D001739 ORTHO05D015654 4.5e-112 409.5 601 45.3
FAN19G1672 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.2e-111 407.1 619 44.9
FAN26G3321 Fragaria x ananassa HOM05D001739 ORTHO05D015654 3.7e-106 389.8 601 44.3
FvH4_1g08670 Fragaria vesca HOM05D001739 ORTHO05D025407 9.9e-104 381.7 610 44.4
FAN26G3373 Fragaria x ananassa HOM05D001739 ORTHO05D015654 3.3e-99 366.7 608 42.9
FvH4_1g08750 Fragaria vesca HOM05D001739 ORTHO05D015654 2.1e-98 364.0 606 42.2
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 1.0e-84 318.5 504 41.3
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 4.3e-83 313.2 489 41.7
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 2.2e-82 310.8 497 39.0
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.1e-81 306.6 506 38.7
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 5.3e-81 306.2 502 39.0
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 1.5e-80 304.7 505 39.4
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.6e-80 303.9 509 39.5
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 4.5e-80 303.1 474 41.4
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 2.2e-79 300.8 509 39.1
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 2.9e-79 300.4 499 40.1
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 8.5e-79 298.9 507 39.3
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.2e-77 295.0 509 38.7
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 3.6e-77 293.5 485 38.6
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.1e-77 292.7 539 37.7
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 3.9e-76 290.0 479 40.5
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 1.1e-75 288.5 497 39.0
FvH4_1g13570 Fragaria vesca HOM05D001739 ORTHO05D004575 1.5e-75 288.1 518 38.6
FvH4_1g13610 Fragaria vesca HOM05D001739 ORTHO05D004575 3.3e-75 287.0 531 38.2
FAN19G0770 Fragaria x ananassa HOM05D001739 ORTHO05D004575 5.7e-75 286.2 531 38.2
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 7.4e-75 285.8 492 37.4
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 2.8e-74 283.9 573 36.5
FAN26G1945 Fragaria x ananassa HOM05D001739 ORTHO05D035581 8.2e-74 282.3 607 37.1
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 1.4e-73 281.6 501 37.7
FAN23G1058 Fragaria x ananassa HOM05D001739 ORTHO05D025407 1.8e-73 281.2 348 50.0
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 2.4e-73 280.8 523 37.7
FAN19G0960 Fragaria x ananassa HOM05D001739 ORTHO05D025407 5.3e-73 279.6 348 48.6
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 1.2e-72 278.5 535 37.0
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 2.6e-72 277.3 486 37.7
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 3.4e-72 276.9 498 36.9
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 3.4e-72 276.9 490 37.6
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 1.0e-71 275.4 511 36.0
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 1.3e-71 275.0 509 36.1
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 1.7e-71 274.6 512 37.7
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.8e-71 273.5 492 35.6
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 6.5e-71 272.7 501 36.7
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 6.5e-71 272.7 492 35.6
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 8.5e-71 272.3 514 37.2
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 2.5e-70 270.8 514 36.6
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 4.2e-70 270.0 496 36.1
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 4.2e-70 270.0 497 37.4
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 7.2e-70 269.2 490 36.5
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 7.2e-70 269.2 501 36.1
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 8.0e-69 265.8 494 35.8
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 3.0e-68 263.8 490 35.3
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 3.0e-68 263.8 490 35.7
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 3.0e-68 263.8 491 36.5
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 3.9e-68 263.5 499 35.5
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 1.1e-67 261.9 490 35.5
FAN26G0455 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.5e-67 261.5 531 36.9
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 1.5e-67 261.5 508 35.0
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 4.4e-67 260.0 500 35.0
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 2.8e-66 257.3 507 34.9
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 2.8e-66 257.3 523 35.4
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 2.4e-65 254.2 496 34.5
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 3.1e-65 253.8 512 35.5
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 5.3e-65 253.1 485 34.6
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 7.0e-65 252.7 501 33.9
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 9.1e-65 252.3 500 35.8
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 1.6e-64 251.5 473 36.2
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 3.5e-64 250.4 505 34.5
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 1.3e-63 248.4 516 33.9
FAN26G3327 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.9e-63 247.3 603 35.2
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 3.8e-63 246.9 506 35.0
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 3.8e-63 246.9 493 34.1
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 3.8e-63 246.9 489 36.2
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 5.0e-63 246.5 499 32.9
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 8.5e-63 245.7 492 35.6
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 8.5e-63 245.7 511 35.0
FvH4_5g06040 Fragaria vesca HOM05D001739 ORTHO05D029422 8.5e-63 245.7 597 33.8
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 2.5e-62 244.2 505 33.3
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 3.2e-62 243.8 500 34.8
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.2e-62 243.4 498 33.9
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.5e-62 243.0 493 34.9
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 5.5e-62 243.0 513 32.7
SHI02768 Sapria himalayana HOM05D001739 ORTHO05D004575 5.5e-62 243.0 477 35.8
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 7.2e-62 242.7 485 34.6
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 7.2e-62 242.7 498 33.7
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.2e-61 241.9 551 32.3
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 3.6e-61 240.4 500 34.2
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 1.8e-60 238.0 488 34.4
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 5.2e-60 236.5 505 34.1
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 1.5e-59 235.0 488 34.2
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 1.5e-59 235.0 509 33.2
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 7.5e-59 232.6 496 33.1
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 9.7e-59 232.3 467 34.5
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 2.8e-58 230.7 419 35.8
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 2.8e-58 230.7 496 33.5
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 4.8e-58 229.9 502 32.5
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 3.5e-56 223.8 515 30.5
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 3.5e-56 223.8 486 33.3
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 1.0e-55 222.2 510 31.8
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 1.7e-55 221.5 508 31.1
TPR.G13945 Trifolium pratense HOM05D001739 ORTHO05D004575 2.9e-55 220.7 500 33.6
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 6.5e-55 219.5 512 32.0
AUR62028280 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.1e-54 218.8 498 32.1
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 1.1e-54 218.8 524 32.4
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 2.5e-54 217.6 512 33.0
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 7.2e-54 216.1 504 32.5
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 1.2e-53 215.3 514 32.1
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 2.1e-53 214.5 472 34.3
FAN08G1830 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.1e-53 213.0 533 34.3
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 8.0e-53 212.6 497 33.4
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 1.0e-52 212.2 473 33.4
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 1.0e-52 212.2 520 31.3
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 3.0e-52 210.7 472 33.5
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 5.2e-52 209.9 498 32.3
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 1.2e-51 208.8 488 32.6
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 2.0e-51 208.0 480 32.9
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 2.0e-51 208.0 472 33.1
FAN18G1935 Fragaria x ananassa HOM05D001739 ORTHO05D029422 2.6e-51 207.6 520 33.5
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 7.5e-51 206.1 472 32.8
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 7.5e-51 206.1 487 30.4
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 9.8e-51 205.7 472 33.3
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 2.2e-50 204.5 493 31.6
BraA05t20081Z Brassica rapa HOM05D001739 ORTHO05D004575 3.7e-50 203.8 474 32.5
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 1.1e-49 202.2 504 31.9
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 1.1e-49 202.2 477 32.7
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 1.8e-49 201.4 474 32.5
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 4.1e-49 200.3 474 32.7
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.2e-48 198.7 473 33.0
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 2.0e-48 198.0 475 32.2
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 2.0e-48 198.0 475 32.2
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 1.3e-47 195.3 459 33.3
FvH4_5g05990 Fragaria vesca HOM05D001739 ORTHO05D029422 1.7e-47 194.9 519 32.4
FAN23G2998 Fragaria x ananassa HOM05D001739 ORTHO05D198978 3.8e-47 193.7 233 50.2
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 6.5e-47 193.0 477 32.9
FAN26G1219 Fragaria x ananassa HOM05D001739 ORTHO05D210162 1.5e-46 191.8 377 37.7
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 5.5e-46 189.9 493 28.4
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 9.5e-46 189.1 507 31.2
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 1.8e-44 184.9 534 30.3
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 1.8e-44 184.9 534 30.3
FAN18G0943 Fragaria x ananassa HOM05D001739 ORTHO05D029422 3.4e-43 180.6 519 30.8
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 3.4e-43 180.6 353 34.3
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 7.5e-43 179.5 361 32.7
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 5.0e-39 166.8 460 28.3
FAN28G3010 Fragaria x ananassa HOM05D001739 ORTHO05D207861 1.6e-37 161.8 231 47.2
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 2.1e-37 161.4 377 30.5
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 8.0e-37 159.5 506 25.7
CAN.G333.15 Capsicum annuum HOM05D001739 ORTHO05D004575 1.8e-36 158.3 283 36.4
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 9.5e-30 136.0 500 24.8
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 2.1e-29 134.8 450 26.4
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.2e-29 133.3 140 52.1
FAN19G1997 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.4e-28 132.1 217 41.0
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.8e-28 131.7 469 25.8
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis HOM05D001739 ORTHO05D004575 3.1e-28 131.0 502 22.7
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 1.5e-27 128.6 245 35.5
FAN23G2122 Fragaria x ananassa HOM05D001739 ORTHO05D035581 2.2e-26 124.8 207 44.4
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 5.4e-25 120.2 497 24.9
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 2.3e-23 114.8 474 23.8
FAN04G1381 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.7e-21 107.1 156 42.9
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 4.0e-20 104.0 107 47.7
MD02G1098900 Malus domestica HOM05D001739 ORTHO05D004575 4.4e-19 100.5 121 47.9
FAN26G0957 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.9e-17 95.1 113 49.6
CDE12G0742 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 2.4e-17 94.7 152 38.8
FvH4_1g13590 Fragaria vesca HOM05D001739 ORTHO05D035581 1.2e-16 92.4 122 51.6
EL10Ac8g19019 Beta vulgaris HOM05D001739 ORTHO05D010736 2.8e-13 81.3 150 32.7
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 8.9e-12 76.3 548 19.5
Rhsim13G0126900 Rhododendron simsii HOM05D001739 ORTHO05D004575 1.2e-11 75.9 111 38.7
FvH4_6g18960 Fragaria vesca HOM05D001739 ORTHO05D035276 1.9e-09 68.6 157 30.6
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 4.2e-09 67.4 465 21.9
Duzib093G0255 Durio zibethinus HOM05D001739 ORTHO05D006605 2.1e-08 65.1 510 21.2
Sp7g21460 Schrenkiella parvula HOM05D001739 ORTHO05D006605 3.5e-08 64.3 507 20.7
MBI19_g41435_MAGBIO Magnolia biondii HOM05D001739 ORTHO05D006605 1.5e-06 58.9 515 20.8
TPR.G10174 Trifolium pratense HOM05D001739 ORTHO05D004575 3.3e-06 57.8 254 25.2
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 5.6e-06 57.0 161 28.0


User provided reference genes

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