Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-192 674.9 333 100.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-192 674.9 333 100.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.6e-149 532.3 362 77.6
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 5.1e-145 518.1 314 84.7
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 5.7e-120 434.9 360 65.6
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 7.2e-115 417.9 361 61.5
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.7e-111 405.6 237 85.7
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 9.4e-107 391.0 362 58.3
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.2e-106 390.6 365 56.7
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 3.6e-106 389.0 360 57.8
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 3.6e-106 389.0 390 55.9
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 6.1e-106 388.3 397 56.2
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.0e-105 387.5 363 57.9
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 3.3e-104 382.5 357 58.0
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.3e-103 378.3 357 56.6
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 6.3e-103 378.3 357 56.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 6.3e-103 378.3 357 56.3
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 8.2e-103 377.9 363 54.5
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 2.4e-102 376.3 357 56.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.2e-101 374.0 369 53.7
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 2.6e-101 372.9 359 56.5
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 1.0e-100 370.9 368 55.4
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.2e-100 369.8 363 54.3
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 7.2e-99 364.8 370 53.8
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 4.7e-98 362.1 366 54.1
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 8.0e-98 361.3 353 55.0
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.0e-97 360.9 352 55.4
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.9e-97 359.0 357 52.9
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 5.2e-97 358.6 372 53.0
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 8.2e-95 351.3 363 53.4
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.1e-94 350.9 367 53.7
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 2.4e-94 349.7 368 53.5
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.6e-93 347.1 354 52.0
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 4.5e-93 345.5 360 53.1
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 6.5e-92 341.7 369 52.0
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.5e-91 340.5 344 54.4
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.5e-91 340.5 365 51.8
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.2e-91 339.3 352 51.7
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 4.2e-91 339.0 362 52.5
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 5.5e-91 338.6 373 53.4
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 3.6e-90 335.9 365 50.7
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.0e-89 334.3 362 51.9
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 1.4e-89 334.0 368 51.9
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 4.0e-89 332.4 436 45.6
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.2e-88 330.9 366 51.4
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.6e-88 329.7 363 52.1
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 3.4e-88 329.3 377 50.9
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 4.4e-88 328.9 360 51.1
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 9.7e-88 327.8 371 50.9
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 9.7e-88 327.8 363 51.0
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.8e-87 326.2 371 50.7
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 8.3e-87 324.7 358 50.3
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 4.1e-86 322.4 364 47.8
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 4.1e-86 322.4 263 60.5
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.0e-85 320.1 263 59.7
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 3.5e-85 319.3 362 48.3
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.7e-84 317.0 363 49.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 2.2e-84 316.6 357 51.3
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.9e-84 316.2 358 48.9
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 8.5e-84 314.7 369 48.5
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.1e-83 314.3 360 48.1
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.5e-83 313.9 363 48.5
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.5e-83 313.9 355 49.3
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.5e-83 313.9 363 48.5
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.5e-83 313.9 358 47.5
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.9e-83 313.5 372 47.8
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 3.2e-83 312.8 365 48.5
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 4.2e-83 312.4 350 49.1
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 7.2e-83 311.6 307 53.7
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 9.4e-83 311.2 362 49.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.2e-82 310.8 347 49.9
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 6.1e-82 308.5 361 48.2
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.3e-81 306.6 255 61.2
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.3e-81 306.6 361 47.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.3e-81 306.6 366 46.7
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 4.0e-81 305.8 362 48.3
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 4.4e-80 302.4 264 55.7
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 9.8e-80 301.2 239 68.2
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 2.2e-79 300.1 349 47.0
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.2e-77 294.3 257 54.9
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 3.5e-77 292.7 373 46.6
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 4.5e-77 292.4 386 44.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.0e-76 291.2 279 52.3
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.3e-76 290.8 233 60.9
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 4.7e-74 282.3 238 59.2
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.8e-73 280.4 244 61.1
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.0e-73 279.6 233 63.1
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 5.7e-72 275.4 362 47.0
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 3.7e-71 272.7 231 60.6
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.4e-70 270.8 340 45.0
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.2e-66 257.7 253 52.6
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 4.4e-64 249.2 346 45.7
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.7e-63 247.3 259 54.4
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 4.9e-63 245.7 227 54.6
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 7.8e-61 238.4 120 97.5
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 7.8e-61 238.4 120 98.3
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.2e-58 231.1 301 45.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 4.7e-58 229.2 172 65.7
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 8.9e-57 224.9 245 46.1
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 7.5e-56 221.9 293 43.7
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.9e-55 219.9 303 41.6
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 2.4e-54 216.9 280 42.5
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.3e-52 210.3 249 44.6
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.8e-50 203.4 245 42.0
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 3.1e-49 199.9 317 40.1
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.1e-34 150.6 347 31.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 9.9e-32 141.7 97 66.0
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 3.9e-28 129.8 229 34.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 3.4e-24 116.7 193 37.3
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.1e-21 107.5 130 50.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.5e-21 106.7 99 55.6
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 9.3e-14 82.0 163 35.0
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 6.0e-13 79.3 45 73.3
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 4.3e-11 73.2 50 72.0
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 5.8e-08 62.8 143 37.1
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 7.6e-08 62.4 143 37.1


User provided reference genes

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