Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 9.1e-174 613.6 342 100.0
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 7.2e-171 604.0 342 98.8
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 5.2e-169 597.8 342 96.8
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.8e-167 592.0 340 96.8
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 8.6e-148 527.3 344 85.2
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 8.4e-127 457.6 344 77.6
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 6.2e-122 441.4 340 74.7
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 4.8e-114 415.2 344 61.0
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 1.6e-109 400.2 344 61.0
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 3.9e-108 395.6 344 68.9
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 3.3e-107 392.5 344 66.3
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 3.1e-105 386.0 337 68.0
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 9.0e-105 384.4 340 67.6
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 4.5e-104 382.1 344 59.6
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 7.6e-104 381.3 344 60.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 2.2e-103 379.8 346 66.8
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 3.9e-100 369.0 344 66.0
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.5e-99 367.1 344 64.5
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 3.3e-99 365.9 338 63.6
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 7.4e-99 364.8 335 63.3
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.3e-98 364.0 344 56.7
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.3e-98 364.0 345 61.2
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.2e-98 363.2 344 56.4
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 3.7e-98 362.5 344 56.1
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.1e-97 360.9 334 62.3
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.1e-97 360.9 335 63.9
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 3.1e-97 359.4 344 61.0
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 5.3e-97 358.6 329 67.5
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.5e-96 357.1 344 56.1
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.6e-96 356.3 344 55.8
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 7.6e-96 354.8 305 68.9
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.3e-95 354.0 344 55.2
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.3e-95 354.0 310 57.4
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 2.2e-95 353.2 334 64.1
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 2.9e-95 352.8 336 56.2
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 5.0e-95 352.1 323 57.6
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.0e-95 352.1 345 63.2
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 2.5e-94 349.7 342 55.3
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 2.5e-94 349.7 325 64.0
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 4.2e-94 349.0 338 57.1
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 1.2e-93 347.4 344 61.3
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 4.6e-93 345.5 330 53.9
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.0e-92 344.4 348 54.9
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 3.0e-92 342.8 334 60.5
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 5.1e-92 342.0 322 56.8
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 6.7e-92 341.7 344 53.5
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 8.8e-92 341.3 323 56.7
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.1e-91 340.9 326 54.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.1e-91 340.9 350 62.6
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.3e-91 339.3 322 56.8
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 4.3e-91 339.0 345 61.7
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 2.8e-90 336.3 334 61.1
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 3.7e-90 335.9 334 61.1
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 4.8e-90 335.5 334 60.8
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 6.3e-90 335.1 344 58.1
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.8e-89 333.6 335 63.0
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 9.1e-89 331.3 305 55.7
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 1.2e-88 330.9 334 60.2
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 2.0e-88 330.1 344 56.1
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 3.4e-88 329.3 323 61.6
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 5.9e-88 328.6 312 62.5
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.2e-87 326.6 334 59.9
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 2.9e-87 326.2 340 59.4
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 6.5e-87 325.1 312 63.1
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.6e-85 320.5 318 52.2
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 2.7e-85 319.7 313 61.7
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 2.7e-85 319.7 313 61.7
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.6e-85 319.3 331 61.3
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 3.9e-84 315.8 325 60.3
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 5.1e-84 315.5 313 61.0
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 6.7e-84 315.1 313 61.0
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.7e-84 315.1 311 60.5
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 2.0e-83 313.5 346 48.0
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.6e-83 313.2 313 60.7
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 5.7e-83 312.0 339 57.8
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.7e-82 310.5 345 49.3
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.8e-81 307.0 345 49.6
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 5.3e-81 305.4 344 56.4
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 7.7e-80 301.6 348 49.1
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 7.7e-80 301.6 354 48.0
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 2.9e-79 299.7 321 48.9
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 3.8e-79 299.3 319 49.2
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.0e-77 291.6 319 48.3
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 1.0e-76 291.2 333 48.9
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.0e-75 287.0 311 50.2
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 1.7e-71 273.9 319 47.3
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.9e-71 273.1 313 56.9
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.6e-69 267.3 267 54.3
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 8.2e-66 255.0 345 42.6
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 5.3e-65 252.3 311 54.0
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.8e-60 235.3 231 63.6
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.2e-54 216.1 191 61.8
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 9.8e-51 204.9 242 47.5
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.2e-50 203.8 185 58.9
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 9.2e-41 171.8 161 54.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 1.1e-38 164.9 180 53.3
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 8.0e-37 158.7 163 50.3
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.5e-30 137.9 113 61.1
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.6e-29 134.4 183 60.1
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-28 131.0 99 65.7
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.0e-28 129.8 178 43.3
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 4.2e-17 93.2 107 44.9
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 6.6e-15 85.9 105 50.5
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 3.6e-13 80.1 115 41.7
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 1.1e-09 68.6 79 46.8


User provided reference genes

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