Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.6e-268 926.8 463 100.0
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.6e-268 926.8 463 100.0
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 4.0e-265 917.5 463 98.9
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 9.9e-264 912.9 463 97.8
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 9.9e-264 912.9 463 97.8
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 8.3e-263 909.8 460 98.3
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 9.2e-262 906.4 463 98.1
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 6.0e-245 850.5 459 92.4
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 1.1e-222 776.5 461 84.2
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 1.4e-217 759.6 455 83.1
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 2.4e-217 758.8 461 82.0
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 1.0e-212 743.4 455 81.5
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 5.7e-211 737.6 457 80.3
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 2.2e-210 735.7 460 79.3
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 6.9e-209 730.7 450 79.3
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 1.5e-208 729.6 450 78.9
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 1.5e-208 729.6 450 78.9
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.5e-208 729.6 450 78.7
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 2.0e-208 729.2 450 78.2
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 2.6e-208 728.8 458 77.5
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 2.2e-207 725.7 450 78.2
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 2.9e-207 725.3 453 78.4
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 2.9e-207 725.3 450 77.8
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 3.8e-207 724.9 454 78.2
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 3.8e-207 724.9 467 77.1
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 8.5e-207 723.8 460 75.9
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.4e-206 723.0 445 78.9
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 1.4e-206 723.0 434 80.6
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 2.5e-206 722.2 450 78.9
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 3.2e-206 721.8 434 81.1
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 3.2e-206 721.8 437 80.5
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 7.2e-206 720.7 468 76.1
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 2.1e-205 719.2 458 76.4
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 1.4e-204 716.5 447 77.2
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 2.3e-204 715.7 439 80.0
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.0e-204 715.3 457 76.4
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 6.7e-204 714.1 450 76.9
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 8.8e-204 713.8 453 77.3
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 8.8e-204 713.8 450 78.2
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 2.6e-203 712.2 439 79.7
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 4.4e-203 711.4 451 77.4
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 5.7e-203 711.1 450 77.1
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 7.4e-203 710.7 451 77.2
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 1.3e-202 709.9 450 77.1
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.7e-202 709.5 450 77.8
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 1.7e-202 709.5 462 76.2
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 4.8e-202 708.0 452 75.4
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 8.2e-202 707.2 455 76.9
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 1.1e-201 706.8 457 74.0
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 1.8e-201 706.1 432 79.6
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 4.1e-201 704.9 431 79.8
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 5.3e-201 704.5 434 79.3
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 9.1e-201 703.7 455 76.5
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 2.0e-200 702.6 452 75.4
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 2.0e-200 702.6 445 77.1
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 2.6e-200 702.2 460 75.0
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 2.6e-200 702.2 425 78.6
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 3.5e-200 701.8 443 77.0
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 4.5e-200 701.4 448 77.0
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 5.9e-200 701.0 455 74.7
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.7e-200 700.7 444 77.3
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 1.0e-199 700.3 457 75.5
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 3.8e-199 698.4 433 77.1
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 6.5e-199 697.6 447 75.8
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.1e-198 696.8 450 76.2
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.1e-198 696.8 450 76.2
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 1.1e-198 696.8 483 72.0
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.9e-198 696.0 442 75.1
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 3.2e-198 695.3 458 75.5
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 4.2e-198 694.9 442 76.9
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 5.5e-198 694.5 459 75.6
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 7.2e-198 694.1 446 76.7
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 1.2e-197 693.3 442 76.5
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.6e-197 693.0 442 76.2
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 1.6e-197 693.0 446 74.4
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.6e-197 693.0 443 77.2
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 1.6e-197 693.0 443 76.7
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 2.7e-197 692.2 456 75.2
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.6e-197 691.8 464 74.6
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 4.7e-197 691.4 453 74.0
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 6.1e-197 691.0 459 74.9
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 1.0e-196 690.3 461 74.8
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.4e-196 689.9 460 75.0
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 1.4e-196 689.9 439 76.1
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 3.0e-196 688.7 432 76.4
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 4.0e-196 688.3 457 76.4
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 6.7e-196 687.6 441 78.0
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 1.1e-195 686.8 452 75.2
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 1.5e-195 686.4 452 75.4
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 1.5e-195 686.4 428 77.3
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 2.0e-195 686.0 426 78.2
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 2.6e-195 685.6 449 75.1
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 7.5e-195 684.1 460 74.8
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 6.3e-194 681.0 450 74.4
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 2.4e-193 679.1 460 73.9
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 3.1e-193 678.7 439 74.9
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 5.3e-193 677.9 444 74.1
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 7.0e-193 677.6 465 71.6
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 1.0e-191 673.7 427 76.6
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 1.7e-191 672.9 451 73.4
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 6.5e-191 671.0 415 78.8
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 8.5e-191 670.6 443 76.5
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 1.9e-190 669.5 446 74.7
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 2.5e-190 669.1 452 72.3
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 2.5e-190 669.1 445 73.9
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 4.2e-190 668.3 450 73.3
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 9.4e-190 667.2 464 72.4
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 1.2e-189 666.8 440 72.5
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.6e-189 665.2 439 73.8
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 4.0e-188 661.8 437 72.1
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 6.8e-188 661.0 453 70.2
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 6.8e-188 661.0 453 70.2
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.5e-187 659.8 401 79.1
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 1.5e-187 659.8 433 72.5
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 3.4e-187 658.7 438 72.1
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 3.4e-187 658.7 406 78.8
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 4.4e-187 658.3 455 70.1
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 9.8e-187 657.1 445 71.5
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.7e-186 655.2 436 73.6
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 1.8e-185 652.9 443 71.1
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.8e-185 652.9 406 78.1
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 1.8e-185 652.9 441 73.0
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 4.1e-185 651.7 436 73.4
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 7.0e-185 651.0 434 72.1
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 1.2e-184 650.2 434 71.9
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.6e-184 649.8 434 71.9
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 4.5e-184 648.3 434 71.7
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 7.7e-184 647.5 429 71.8
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.1e-182 643.7 438 71.7
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 6.1e-181 637.9 448 68.5
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 5.2e-180 634.8 389 79.2
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 5.2e-180 634.8 444 70.3
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 2.6e-179 632.5 449 69.3
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.4e-177 626.7 444 69.1
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 2.4e-177 625.9 446 70.2
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 2.0e-176 622.9 370 81.1
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 5.9e-176 621.3 364 81.3
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 2.5e-174 615.9 425 68.2
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 1.0e-172 610.5 383 77.0
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 1.2e-171 607.1 384 76.3
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 4.4e-171 605.1 441 68.7
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 4.1e-169 598.6 380 78.9
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 4.3e-166 588.6 365 77.5
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 2.8e-157 559.3 450 64.4
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 1.7e-146 523.5 440 60.5
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.4e-145 520.4 430 61.9
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.8e-141 506.1 438 60.3
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.9e-138 496.1 429 59.2
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 3.9e-135 485.7 418 56.9
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 5.8e-131 471.9 444 56.3
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 1.2e-120 437.6 306 68.0
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 3.9e-119 432.6 282 74.5
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 3.4e-115 419.5 438 49.8
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 1.8e-111 407.1 236 80.9
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 8.5e-106 388.3 231 81.0
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 1.1e-102 377.9 434 46.1
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 7.4e-102 375.2 272 68.4
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 1.6e-96 357.5 423 46.6
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 2.2e-93 347.1 376 47.1
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 8.2e-77 292.0 280 57.5
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 2.8e-69 266.9 165 78.8
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 1.4e-55 221.5 151 74.2
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.3e-45 188.3 113 77.9
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 6.8e-39 166.0 95 82.1
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 2.6e-38 164.1 432 29.6
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 5.8e-38 162.9 126 62.7
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 1.9e-36 157.9 451 30.2
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 5.6e-25 119.8 84 64.3
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 1.4e-23 115.2 75 76.0
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 6.9e-15 86.3 60 66.7
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 3.8e-13 80.5 79 55.7
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 1.1e-07 62.4 193 28.5
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 4.0e-07 60.5 198 26.8
Lj1g0000746 Lotus japonicus HOM05D001886 ORTHO05D005666 5.3e-07 60.1 196 26.5
Eucgr.K03155 Eucalyptus grandis HOM05D001886 ORTHO05D005666 9.0e-07 59.3 197 25.4
Glyma.03G172100 Glycine max HOM05D001886 ORTHO05D005666 1.2e-06 58.9 147 27.2
Thecc.05G043700 Theobroma cacao HOM05D001886 ORTHO05D005666 1.2e-06 58.9 194 23.2
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 1.5e-06 58.5 107 26.2
Glyma.19G173000 Glycine max HOM05D001886 ORTHO05D005666 2.0e-06 58.2 147 27.2
Os12g0566900 Oryza sativa ssp. japonica HOM05D001886 ORTHO05D005666 2.0e-06 58.2 147 27.9
Phvul.001G169800 Phaseolus vulgaris HOM05D001886 ORTHO05D005666 2.0e-06 58.2 392 23.2
Psat3g049200 Pisum sativum HOM05D001886 ORTHO05D005666 2.0e-06 58.2 197 24.9
Zm00001eb028780 Zea mays HOM05D001886 ORTHO05D005666 3.4e-06 57.4 171 25.7
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 7.6e-06 56.2 43 62.8


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