Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.2e-85 318.5 179 100.0
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-51 207.2 117 96.6
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.5e-39 166.8 104 84.6
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.0e-39 166.4 104 80.8
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 8.5e-38 161.0 103 76.7
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.6e-36 156.8 103 74.8
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.1e-36 156.4 96 80.2
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 2.1e-36 156.4 115 70.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 2.7e-36 156.0 102 78.4
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 3.6e-36 155.6 103 76.7
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.6e-36 155.6 102 76.5
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.0e-35 154.1 102 76.5
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.4e-35 153.7 106 76.4
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.4e-35 153.7 106 76.4
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 3.9e-35 152.1 102 75.5
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 3.9e-35 152.1 102 75.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.9e-35 152.1 102 74.5
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 5.1e-35 151.8 119 68.1
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 5.1e-35 151.8 103 75.7
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.7e-35 151.4 102 73.5
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.7e-35 151.4 102 73.5
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 6.7e-35 151.4 102 75.5
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.8e-35 151.0 87 89.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 8.8e-35 151.0 102 76.5
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 8.8e-35 151.0 106 74.5
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-34 150.6 102 73.5
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.1e-34 150.6 103 73.8
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.5e-34 150.2 103 73.8
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.5e-34 150.2 107 73.8
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.6e-34 149.4 101 74.3
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 2.6e-34 149.4 99 77.8
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.3e-34 149.1 102 73.5
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 3.3e-34 149.1 109 73.4
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 4.4e-34 148.7 103 72.8
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.3e-33 147.1 104 70.2
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.3e-33 147.1 106 71.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.7e-33 146.7 101 72.3
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.7e-33 146.7 102 72.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 1.7e-33 146.7 101 73.3
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.2e-33 146.4 96 79.2
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.8e-33 145.2 107 71.0
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.8e-33 145.2 107 71.0
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 6.3e-33 144.8 102 72.5
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 8.2e-33 144.4 101 72.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.1e-32 144.1 99 74.7
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.1e-32 144.1 104 71.2
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.8e-32 143.3 113 65.5
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.8e-32 143.3 99 73.7
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.4e-32 142.9 103 69.9
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.4e-32 142.9 117 64.1
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 2.4e-32 142.9 111 67.6
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-32 142.1 102 69.6
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.1e-32 142.1 108 67.6
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 4.1e-32 142.1 107 70.1
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 5.3e-32 141.7 114 66.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 9.1e-32 141.0 96 72.9
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 9.1e-32 141.0 99 72.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.2e-31 140.6 102 71.6
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.2e-31 140.6 102 71.6
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 2.0e-31 139.8 99 69.7
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-31 139.4 77 93.5
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 5.9e-31 138.3 105 69.5
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 5.9e-31 138.3 95 72.6
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.9e-31 138.3 99 71.7
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 7.7e-31 137.9 110 64.5
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.0e-30 137.5 100 74.0
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.3e-30 137.1 99 71.7
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 2.2e-30 136.3 99 71.7
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 2.9e-30 136.0 102 65.7
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 6.5e-30 134.8 107 68.2
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 6.5e-30 134.8 99 69.7
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.2e-29 131.3 76 89.5
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.1e-28 129.8 76 88.2
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.7e-28 129.4 106 62.3
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 4.7e-28 128.6 95 68.4
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 4.7e-28 128.6 99 66.7
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 8.0e-28 127.9 100 62.0
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.0e-27 127.5 97 68.0
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.0e-27 127.5 98 63.3
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 2.3e-27 126.3 112 58.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 5.2e-27 125.2 96 64.6
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 5.2e-27 125.2 96 64.6
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 5.2e-27 125.2 71 90.1
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 8.8e-27 124.4 96 63.5
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 2.0e-26 123.2 103 63.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 2.0e-26 123.2 109 62.4
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-26 122.9 83 73.5
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.6e-26 122.9 100 61.0
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 7.4e-26 121.3 85 67.1
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.8e-25 119.4 87 74.7
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 4.1e-24 115.5 84 67.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 7.0e-24 114.8 95 64.2
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.0e-23 113.2 86 65.1
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 2.0e-23 113.2 82 72.0
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.6e-23 112.8 112 60.7
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-23 112.8 112 60.7
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 5.9e-23 111.7 89 65.2
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.3e-22 110.5 89 64.0
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.8e-22 109.0 92 64.1
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 5.0e-22 108.6 90 66.7
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.5e-21 106.3 80 65.0
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.5e-21 105.1 63 82.5
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.7e-20 102.8 82 63.4
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 8.0e-20 101.3 87 60.9
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.4e-19 100.5 63 77.8
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.8e-19 100.1 74 64.9
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.0e-19 99.0 74 64.9
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 4.0e-19 99.0 72 66.7
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 5.2e-19 98.6 72 66.7
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 6.8e-19 98.2 63 76.2
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 8.8e-19 97.8 74 63.5
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 8.8e-19 97.8 72 66.7
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 8.8e-19 97.8 72 66.7
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.8e-19 97.8 63 73.0
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.8e-19 97.8 63 73.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 8.8e-19 97.8 70 67.1
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.2e-18 97.4 72 68.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.0e-18 96.7 70 67.1
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.0e-18 96.7 70 67.1
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.7e-17 93.6 94 48.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 3.7e-17 92.4 63 71.4
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.8e-16 90.1 86 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.1e-13 80.9 91 44.0
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.2e-13 79.0 104 51.9
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 5.5e-13 78.6 71 52.1
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 3.6e-12 75.9 76 50.0
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.2e-10 70.9 43 79.1
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.0e-10 70.1 80 43.8
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 3.4e-10 69.3 46 69.6
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.3e-09 64.7 41 78.0


User provided reference genes

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