Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.2e-187 656.8 333 100.0
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.5e-157 559.7 333 88.3
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.1e-145 518.1 333 82.3
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 2.0e-141 506.1 333 81.1
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-139 500.0 334 80.8
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.6e-138 495.0 330 80.6
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-108 397.1 216 94.0
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 6.2e-50 202.2 344 42.7
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.9e-46 190.7 350 43.1
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.1e-46 189.5 348 43.4
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.4e-46 189.1 348 43.1
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.1e-42 177.2 347 41.2
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.5e-40 171.0 347 40.3
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 2.6e-40 170.2 348 40.2
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.7e-31 141.0 369 36.9
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 3.0e-28 130.2 361 34.1
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 8.7e-28 128.6 360 35.3
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 3.3e-27 126.7 358 33.8
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 5.6e-27 125.9 356 33.4
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 1.3e-26 124.8 357 33.6
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 4.8e-26 122.9 370 34.1
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 3.1e-25 120.2 337 35.6
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 4.0e-25 119.8 360 31.7
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 1.3e-23 114.8 362 33.4
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 4.9e-23 112.8 357 32.8
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 8.4e-23 112.1 360 31.9
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 1.9e-22 110.9 362 33.4
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 4.2e-22 109.8 358 32.1
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 4.2e-22 109.8 368 32.1
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 1.8e-20 104.4 346 32.7
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 2.5e-19 100.5 356 34.3
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.8e-18 97.1 347 31.1
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 4.8e-18 96.3 343 30.3
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 4.8e-18 96.3 342 32.2
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 6.2e-18 95.9 341 30.8
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 8.1e-18 95.5 249 34.5
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 1.1e-17 95.1 378 31.0
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 4.0e-17 93.2 338 32.2
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 5.3e-17 92.8 335 32.2
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 6.9e-17 92.4 339 29.5
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 9.0e-17 92.0 354 32.8
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 2.0e-16 90.9 362 27.9
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 2.6e-16 90.5 360 30.8
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.7e-15 87.8 352 28.4
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 1.1e-14 85.1 341 31.1
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 1.9e-14 84.3 332 29.2
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 3.2e-14 83.6 336 32.4
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 5.5e-14 82.8 352 30.4
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 5.5e-14 82.8 279 30.5
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.2e-13 81.6 359 28.7
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 1.6e-13 81.3 340 32.6
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-13 81.3 330 29.1
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 2.7e-13 80.5 360 27.5
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.6e-13 79.7 330 29.1
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 4.6e-13 79.7 355 29.6
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 7.9e-13 79.0 339 28.3
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.0e-12 78.6 354 26.8
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 3.0e-12 77.0 351 26.2
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 3.0e-12 77.0 363 30.0
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 3.9e-12 76.6 353 26.3
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 5.1e-12 76.3 353 30.3
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.7e-12 75.9 332 28.6
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 1.9e-11 74.3 368 27.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 2.5e-11 73.9 317 28.4
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 3.3e-11 73.6 120 44.2
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 4.3e-11 73.2 351 27.4
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 5.7e-11 72.8 356 27.8
FAN06G3406 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.7e-11 72.8 115 44.3
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 9.6e-11 72.0 336 30.1
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 9.6e-11 72.0 269 29.0
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.3e-10 71.6 358 26.5
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.3e-10 71.6 348 28.7
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 1.6e-10 71.2 282 27.7
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 1.6e-10 71.2 342 32.2
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 2.1e-10 70.9 341 28.2
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 2.8e-10 70.5 360 28.3
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 6.2e-10 69.3 345 27.5
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 8.2e-10 68.9 256 31.2
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.8e-09 67.8 350 29.4
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.8e-09 67.8 362 26.5
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 6.9e-09 65.9 139 41.0
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 1.2e-08 65.1 335 28.1
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.2e-08 65.1 359 28.1
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.6e-08 63.9 342 27.2
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 2.6e-08 63.9 323 28.5
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 4.5e-08 63.2 361 26.3
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 5.8e-08 62.8 358 28.2
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 7.6e-08 62.4 200 33.0
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 1.7e-07 61.2 353 28.6
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.2e-07 60.8 355 29.3
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 2.9e-07 60.5 354 26.8
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 6.5e-07 59.3 351 27.1
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 6.5e-07 59.3 346 24.9
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 8.4e-07 58.9 255 26.7
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 8.4e-07 58.9 352 27.0
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-06 58.2 112 38.4
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 1.9e-06 57.8 192 31.8
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 2.5e-06 57.4 356 26.1
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 4.2e-06 56.6 196 33.2
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 5.5e-06 56.2 351 27.4
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 7.2e-06 55.8 118 42.4
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 9.3e-06 55.5 353 26.9
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 9.3e-06 55.5 353 26.9


User provided reference genes

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