Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3448 Fragaria x ananassa HOM05D000876 ORTHO05D012261 1.1e-102 376.7 203 100.0
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 2.1e-53 213.0 129 86.0
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-53 213.0 129 86.0
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-53 213.0 129 86.0
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.8e-53 211.8 129 85.3
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 6.2e-53 211.5 129 85.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 8.1e-53 211.1 129 85.3
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.1e-52 209.1 128 84.4
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-51 207.2 129 83.7
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 2.0e-51 206.5 129 83.7
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.5e-43 178.7 95 93.7
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.4e-42 174.5 95 92.6
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.2e-41 172.2 93 92.5
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-41 171.0 97 89.7
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-41 171.0 97 89.7
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-40 170.6 99 88.9
FAN20G0421 Fragaria x ananassa HOM05D016452 ORTHO05D012261 6.5e-26 121.7 77 98.7
FvH4_4g10122 Fragaria vesca HOM05D000045 ORTHO05D012261 1.9e-25 120.2 77 97.4
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.2e-25 118.2 132 53.0
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-25 117.9 132 53.0
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 5.1e-23 112.1 130 51.5
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 5.1e-23 112.1 130 51.5
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-22 109.8 132 48.5
FAN03G1971 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-20 104.0 114 52.6
FvH4_4g28751 Fragaria vesca HOM05D000045 ORTHO05D003357 4.1e-20 102.4 77 83.1
FAN14G5115 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.3e-20 102.1 130 49.2
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.0e-20 101.3 130 50.0
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-18 97.4 130 47.7
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-18 97.1 130 47.7
FAN21G2291 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-16 90.5 97 52.6
FAN09G3305 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-16 89.4 94 50.0
FAN10G3852 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-15 87.8 113 49.6
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-15 86.7 134 44.0
FvH4_2g04881 Fragaria vesca HOM05D016452 ORTHO05D003357 5.1e-15 85.5 62 75.8
FAN09G3146 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-15 85.5 82 52.4
FAN04G2125 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.3e-14 82.4 101 48.5
FAN12G1859 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-14 81.6 69 62.3
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 1.3e-13 80.9 94 45.7
FAN26G2716 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.8e-13 79.0 65 60.0
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 6.3e-13 78.6 99 48.5
FAN09G0655 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-12 77.0 90 46.7
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 3.1e-12 76.3 59 55.9
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-12 76.3 59 55.9
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-12 76.3 59 55.9
FAN10G2856 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-12 75.9 59 55.9
FAN11G2191 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-12 75.9 59 55.9
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 3.4e-11 72.8 114 38.6
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 4.5e-11 72.4 114 38.6
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 1.0e-10 71.2 58 53.4
FAN20G0415 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-10 70.5 52 57.7
FvH4_3g29921 Fragaria vesca HOM05D000876 ORTHO05D000285 2.9e-10 69.7 49 59.2
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 5.0e-10 68.9 115 35.7
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 5.0e-10 68.9 115 35.7
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 5.0e-10 68.9 122 34.4
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 8.5e-10 68.2 115 35.7
FAN24G3169 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.5e-10 68.2 98 41.8
FAN07G2331 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-09 67.8 53 60.4
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-09 67.4 94 46.8
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-09 67.0 76 55.3
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.2e-09 66.2 92 38.0
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 4.2e-09 65.9 115 34.8
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 5.5e-09 65.5 116 35.3
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 5.5e-09 65.5 113 36.3
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.5e-09 65.5 116 36.2
CANSAT56G0752 Cannabis sativa HOM05D000876 ORTHO05D000285 1.6e-08 63.9 56 50.0
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 2.7e-08 63.2 115 33.9
FAN28G0183 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.9e-08 61.6 147 38.8
FvH4_1g19130 Fragaria vesca HOM05D000876 ORTHO05D000285 1.0e-07 61.2 94 40.4
FAN05G3579 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-07 61.2 82 41.5
Atru.chr11.924 Acer truncatum HOM05D000034 ORTHO05D000285 1.4e-07 60.8 71 42.3
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 1.4e-07 60.8 103 35.9
Hund15113 Selenicereus undatus HOM05D009081 ORTHO05D000285 1.4e-07 60.8 78 38.5
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-07 60.5 128 33.6
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-07 60.5 129 34.9
Gorai.005G209400 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-07 60.5 55 47.3
Prupe.6G155900 Prunus persica HOM05D000876 ORTHO05D000285 1.8e-07 60.5 52 46.2
FAN03G0686 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-07 60.1 80 45.0
Gorai.009G359600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.3e-07 60.1 47 53.2
Gorai.008G062400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-07 59.3 47 53.2
Gorai.006G093000 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.1e-07 58.9 47 51.1
Hund22647 Selenicereus undatus HOM05D009081 ORTHO05D000285 5.1e-07 58.9 75 38.7
arahy.Tifrunner.gnm1.ann1.YU6CAC Arachis hypogaea HOM05D000876 ORTHO05D000285 6.7e-07 58.5 96 38.5
Gorai.013G161600 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.7e-07 58.5 55 50.9
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 6.7e-07 58.5 92 34.8
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-07 58.2 138 32.6
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 8.8e-07 58.2 115 34.8
Potri.001G402200 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.8e-07 58.2 59 42.4
Potri.008G196901 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.8e-07 58.2 109 34.9
HPP92_015385 Vanilla planifolia HOM05D000876 ORTHO05D000285 8.8e-07 58.2 136 32.4
HPP92_027007 Vanilla planifolia HOM05D000876 ORTHO05D000285 8.8e-07 58.2 136 32.4
Potri.008G205550 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-06 57.8 91 33.0
Gorai.004G157500 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-06 57.4 47 51.1
Gorai.005G108600 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-06 57.4 47 51.1
Potri.011G125150 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-06 57.4 59 42.4
CANSAT01G2704 Cannabis sativa HOM05D000876 ORTHO05D000285 2.0e-06 57.0 56 42.9
Gorai.007G271200 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.0e-06 57.0 61 42.6
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.0e-06 57.0 123 29.3
Hma1.2p1_0344F.1_g131050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-06 57.0 50 48.0
Hma1.2p1_0344F.1_g131060 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-06 57.0 50 48.0
Potri.001G238000 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.0e-06 57.0 59 40.7
TWI73G0844 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.0e-06 57.0 78 38.5
COL.COLO4_03464 Corchorus olitorius HOM05D000876 ORTHO05D000285 2.6e-06 56.6 86 40.7
FAN23G0726 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-06 56.6 41 56.1
Gorai.007G119700 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 47 51.1
Gorai.007G190400 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 47 48.9
Gorai.011G123600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 47 51.1
Potri.015G012100 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.6e-06 56.6 59 42.4
TWI74G0206 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 78 38.5
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 3.3e-06 56.2 86 37.2
CANSAT01G0374 Cannabis sativa HOM05D000876 ORTHO05D000285 3.3e-06 56.2 113 31.9
COL.COLO4_03588 Corchorus olitorius HOM05D000876 ORTHO05D000285 3.3e-06 56.2 86 39.5
Gorai.004G036300 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 89 34.8
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 47 48.9
Gorai.006G056900 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 47 48.9
Gorai.008G032400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 89 34.8
Gorai.012G109800 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 47 48.9
Potri.004G097601 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.3e-06 56.2 59 42.4
TWI56G1418 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.3e-06 56.2 93 37.6
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 4.4e-06 55.8 116 35.3
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 112 35.7
Gohir.D08G116700 Gossypium hirsutum HOM05D000876 ORTHO05D000285 4.4e-06 55.8 47 48.9
Potri.001G299100 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.003G192350 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.004G230401 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.006G149001 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.007G062850 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.013G144650 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.014G091925 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 40.7
Potri.018G054501 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-06 55.8 59 42.4
Gorai.004G036600 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-06 55.5 47 48.9
Gorai.008G084800 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-06 55.5 47 48.9
Gorai.013G197100 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-06 55.5 47 48.9
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 5.7e-06 55.5 75 45.3
arahy.Tifrunner.gnm1.ann1.TD2IRW Arachis hypogaea HOM05D000876 ORTHO05D000285 7.4e-06 55.1 77 41.6
Potri.003G006700 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.4e-06 55.1 59 40.7
Potri.010G132850 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.4e-06 55.1 59 40.7
HPP92_018135 Vanilla planifolia HOM05D000876 ORTHO05D000285 7.4e-06 55.1 115 32.2
AUR62029027 Chenopodium quinoa HOM05D000876 ORTHO05D017254 9.7e-06 54.7 51 47.1
AUR62036787 Chenopodium quinoa HOM05D000876 ORTHO05D031658 9.7e-06 54.7 54 48.1
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-06 54.7 73 46.6
SGA_v2.0_scaffold52G19145 Striga asiatica HOM05D023076 ORTHO05D011211 9.7e-06 54.7 125 33.6


User provided reference genes

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