Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1254.6 660 100.0
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1230.3 650 99.8
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 0.0e+00 1188.3 650 96.6
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1172.1 650 94.6
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1161.0 650 94.6
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 0.0e+00 1129.4 662 91.5
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.3e-277 959.5 650 78.0
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.7e-262 908.7 650 75.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 1.8e-255 885.9 656 73.3
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.6e-243 846.3 644 70.3
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 3.6e-243 845.1 651 69.1
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 5.2e-242 841.3 650 69.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 2.2e-240 835.9 651 68.7
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.0e-237 827.0 652 68.6
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 2.3e-237 825.9 652 68.9
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.0e-234 817.0 657 66.5
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.0e-229 798.9 653 67.1
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.5e-228 796.6 649 66.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.2e-226 788.1 650 66.2
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.5e-225 786.6 656 66.3
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.4e-223 779.2 671 63.9
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 3.2e-223 778.9 648 64.7
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 4.1e-223 778.5 660 63.6
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 4.1e-223 778.5 653 66.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 9.2e-223 777.3 652 65.6
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.6e-222 776.5 656 65.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.1e-222 776.2 651 65.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 4.6e-222 775.0 652 65.5
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.0e-221 773.9 672 62.9
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.3e-221 773.5 662 65.0
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.6e-220 768.1 663 63.3
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 1.2e-219 766.9 663 63.0
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.6e-219 766.5 671 63.2
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 3.6e-219 765.4 656 64.3
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 4.7e-219 765.0 649 64.9
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 6.2e-219 764.6 656 64.0
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 4.0e-218 761.9 658 64.3
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 5.8e-217 758.1 654 64.2
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 4.9e-216 755.0 656 63.1
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 4.9e-216 755.0 669 62.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 6.4e-216 754.6 656 62.8
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.1e-215 753.8 653 62.3
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 4.1e-215 751.9 656 62.7
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 4.1e-215 751.9 656 62.7
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 9.2e-215 750.7 657 63.8
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.6e-214 750.0 646 62.4
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.1e-214 749.6 654 63.6
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.7e-214 749.2 648 63.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 3.5e-214 748.8 654 65.1
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 6.0e-214 748.0 673 60.0
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 7.8e-214 747.7 669 61.6
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.0e-213 747.3 659 61.0
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 2.3e-213 746.1 669 61.7
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 6.6e-213 744.6 659 62.1
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.1e-211 739.6 661 62.2
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 3.6e-211 738.8 671 60.2
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.1e-210 737.3 653 60.9
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 8.9e-210 734.2 654 60.6
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 1.4e-207 726.9 634 62.6
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.4e-207 726.1 669 59.9
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.2e-207 725.3 671 60.4
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.4e-207 724.9 671 59.8
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 9.3e-207 724.2 669 60.5
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.2e-206 723.8 653 61.4
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.2e-206 723.8 653 60.5
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 7.3e-204 714.5 646 61.3
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.8e-202 709.9 660 60.2
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 2.4e-202 709.5 637 61.9
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.2e-201 707.2 639 61.7
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 2.2e-200 703.0 652 59.4
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 2.4e-199 699.5 627 61.4
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 7.9e-198 694.5 608 62.5
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 5.1e-197 691.8 657 59.4
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 4.3e-196 688.7 641 59.8
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 5.6e-196 688.3 653 59.4
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 9.6e-196 687.6 682 58.2
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 4.0e-194 682.2 652 58.0
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.6e-193 679.5 578 64.4
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 7.6e-193 677.9 659 58.6
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.1e-189 665.2 654 58.4
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 5.6e-188 661.8 646 57.9
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.5e-185 653.7 660 54.7
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.7e-184 650.2 682 55.0
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 8.4e-184 647.9 657 56.8
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.2e-182 644.0 683 53.9
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 5.1e-181 638.6 682 53.4
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 9.0e-178 627.9 682 53.2
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 9.0e-178 627.9 677 53.8
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 2.6e-177 626.3 681 53.3
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.6e-177 626.3 661 54.8
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 5.9e-177 625.2 681 53.2
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 1.0e-176 624.4 654 56.3
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.4e-175 620.5 686 51.6
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 3.6e-174 615.9 688 52.5
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 6.1e-174 615.1 677 52.6
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 7.9e-174 614.8 673 52.5
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.9e-172 610.1 618 55.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 8.2e-171 604.7 676 50.9
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.2e-163 580.1 473 64.5
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.8e-134 483.4 697 43.0
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-130 471.5 653 47.5
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.0e-128 464.9 676 43.3
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.1e-127 461.5 559 48.8
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 4.7e-126 456.1 629 45.8
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.3e-119 433.3 694 38.5
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 7.3e-119 432.2 653 40.0
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.6e-116 423.7 311 74.0
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.3e-115 421.4 380 62.6
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.0e-100 370.9 347 58.5
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.3e-99 368.2 320 61.9
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.1e-98 365.2 330 57.3
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 9.6e-79 298.9 242 66.5
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 2.6e-76 290.8 614 32.4
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.0e-56 225.7 252 53.6
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.5e-47 195.3 323 40.2
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 6.3e-46 189.9 260 45.4
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.7e-44 183.0 225 44.9
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 2.3e-32 144.8 359 32.0
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.8e-19 100.9 180 35.0
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 2.9e-11 74.7 87 47.1
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 8.0e-09 66.6 121 40.5
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.5e-07 62.4 242 27.7


User provided reference genes

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