Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1400.6 764 100.0
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1270.0 764 92.7
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1265.4 736 95.2
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 0.0e+00 1264.2 764 92.4
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1219.5 814 85.7
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 0.0e+00 1192.9 734 87.1
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 4.9e-284 981.1 733 73.1
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 7.5e-269 930.6 728 71.2
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 1.5e-216 756.9 710 60.8
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.8e-214 750.0 657 63.3
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.5e-213 746.9 737 59.0
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 2.1e-210 736.5 672 60.7
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 4.4e-208 728.8 661 61.9
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 6.3e-207 724.9 640 63.8
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 6.3e-207 724.9 620 65.5
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 5.3e-206 721.8 743 56.5
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.4e-205 719.2 641 64.0
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.4e-203 713.8 637 63.0
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.9e-203 713.4 723 57.7
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 5.5e-203 711.8 647 61.5
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 6.7e-201 704.9 648 61.9
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.1e-198 697.6 642 61.7
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.3e-196 690.6 657 60.3
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 1.1e-195 687.6 667 60.0
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 1.1e-195 687.6 667 60.0
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 2.5e-195 686.4 662 59.8
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 7.2e-195 684.9 662 59.7
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.0e-193 681.0 662 59.8
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 2.0e-192 676.8 655 60.0
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 3.3e-192 676.0 670 59.6
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.1e-190 671.0 660 59.7
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.4e-190 670.6 726 55.5
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 5.9e-189 665.2 661 58.4
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 1.9e-187 660.2 649 58.6
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 3.2e-187 659.4 724 55.2
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.6e-186 657.1 769 51.6
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.2e-184 651.0 726 54.5
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 3.4e-184 649.4 662 57.9
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 5.9e-181 638.6 673 54.8
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.6e-178 630.6 639 57.4
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 2.3e-177 626.7 653 57.0
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 4.0e-177 625.9 635 57.3
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.2e-176 624.4 671 55.4
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 9.2e-174 614.8 656 53.0
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.7e-172 610.5 648 56.0
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 8.6e-172 608.2 513 65.5
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 3.3e-171 606.3 616 56.5
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 1.6e-170 604.0 654 54.1
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.6e-170 602.8 638 55.6
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 8.0e-170 601.7 607 57.0
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.0e-169 601.3 666 52.6
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.0e-169 601.3 659 54.2
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 3.4e-168 596.3 657 54.6
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 5.8e-168 595.5 730 50.5
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 2.2e-167 593.6 646 55.1
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 6.4e-167 592.0 666 52.1
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.2e-166 589.7 658 53.0
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 7.0e-166 588.6 722 50.1
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.2e-165 587.8 641 55.1
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 2.3e-164 583.6 650 55.1
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 2.5e-163 580.1 587 56.9
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 9.5e-163 578.2 666 52.7
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 6.2e-162 575.5 706 49.4
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.3e-161 573.5 681 51.2
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.9e-159 566.6 687 50.1
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 4.9e-159 565.8 689 49.6
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 2.4e-158 563.5 690 50.9
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 1.6e-154 550.8 629 53.3
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 1.5e-152 544.3 530 57.7
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.6e-152 543.5 677 51.0
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.7e-151 540.8 530 57.4
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.9e-151 540.0 651 49.9
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 6.4e-151 538.9 773 44.4
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.5e-147 527.7 677 49.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.6e-146 523.1 582 54.5
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.1e-145 521.5 645 53.0
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.4e-145 521.2 664 50.5
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 2.0e-144 517.3 582 53.1
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.1e-142 511.5 659 49.9
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 1.7e-140 504.2 664 46.4
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.3e-140 503.8 653 48.4
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.9e-139 500.7 664 49.4
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 3.3e-139 500.0 647 47.0
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 8.1e-138 495.4 696 45.5
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 6.0e-133 479.2 648 50.0
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 4.3e-131 473.0 653 46.7
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 4.2e-126 456.4 693 44.0
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 2.5e-123 447.2 680 45.3
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 3.8e-119 433.3 635 46.6
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 6.0e-117 426.0 650 42.6
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.3e-116 424.9 635 46.3
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 2.3e-116 424.1 709 42.9
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 5.1e-116 422.9 646 45.8
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 3.4e-112 410.2 594 47.0
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 1.4e-110 404.8 673 43.2
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.9e-110 404.4 556 48.7
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 1.9e-110 404.4 634 45.1
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 4.2e-110 403.3 411 59.6
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 7.1e-110 402.5 486 49.0
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 1.2e-109 401.7 663 43.4
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.7e-109 400.6 562 47.9
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 8.2e-106 389.0 493 48.3
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.5e-104 384.8 636 43.9
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.5e-104 384.8 636 43.9
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 5.9e-104 382.9 625 43.2
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 1.2e-101 375.2 592 43.4
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 4.6e-101 373.2 454 51.8
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 7.9e-101 372.5 521 44.0
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 4.5e-96 356.7 675 40.0
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.2e-93 348.6 248 76.2
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.4e-92 345.1 697 38.6
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 2.0e-91 341.3 600 41.8
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.9e-86 324.7 296 58.8
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 2.2e-82 311.2 492 42.7
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 4.1e-81 307.0 574 42.0
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 8.0e-77 292.7 189 74.6
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 2.7e-72 277.7 489 41.9
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 6.3e-66 256.5 266 51.9
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.3e-58 232.3 265 48.7
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 2.3e-55 221.5 158 76.6
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.0e-48 198.4 261 43.7
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 7.3e-46 189.9 545 32.3
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.1e-44 186.0 164 62.2
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.4e-44 185.7 149 66.4
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 7.5e-43 179.9 269 45.0
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 1.7e-42 178.7 302 37.4
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 8.3e-42 176.4 449 32.3
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 9.5e-38 162.9 117 67.5
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 2.8e-37 161.4 164 54.3
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 3.1e-36 157.9 229 45.4
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 2.6e-35 154.8 192 45.3
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 2.1e-32 145.2 132 57.6
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 3.0e-31 141.4 152 53.9
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.1e-28 132.9 150 49.3
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.2e-25 120.9 134 54.5
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 2.3e-23 115.2 138 53.6
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 1.4e-20 105.9 78 74.4
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 1.2e-19 102.8 71 63.4
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 9.9e-19 99.8 106 42.5
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.1e-15 87.4 113 51.3
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 1.4e-12 79.3 73 47.9
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.4e-12 78.6 79 49.4
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 1.7e-10 72.4 48 75.0
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 2.2e-10 72.0 115 42.6
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 7.1e-09 67.0 113 34.5
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 1.0e-07 63.2 55 49.1
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.8e-07 62.4 39 69.2
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 8.7e-07 60.1 55 56.4
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 3.3e-06 58.2 92 41.3
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 5.6e-06 57.4 28 89.3


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