Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3431 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.3e-30 134.8 64 100.0
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-23 110.9 63 87.3
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-23 110.9 63 87.3
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-22 109.0 63 85.7
FvH4_6g12431 Fragaria vesca HOM05D000539 ORTHO05D000233 4.0e-22 107.5 63 82.5
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-21 105.1 63 84.1
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 9.8e-21 102.8 63 82.5
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 9.2e-19 96.3 63 73.0
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 9.2e-19 96.3 63 73.0
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 9.2e-19 96.3 63 73.0
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 9.2e-19 96.3 63 73.0
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 1.5e-13 79.0 38 94.7
FAN11G1867 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-13 79.0 63 61.9
FAN26G3042 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.6e-13 78.2 36 97.2
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 7.5e-13 76.6 63 55.6
RcHm_v2.0_Chr1g0340601 Rosa chinensis HOM05D000539 ORTHO05D000233 9.8e-13 76.3 63 54.0
FvH4_7g16902 Fragaria vesca HOM05D000107 ORTHO05D035324 1.3e-12 75.9 35 94.3
FvH4_7g09681 Fragaria vesca HOM05D000539 ORTHO05D000233 8.3e-12 73.2 65 56.9
FvH4_2g04946 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-11 72.8 38 81.6
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-11 72.4 63 54.0
RcHm_v2.0_Chr2g0147531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-11 72.4 63 52.4
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-11 72.4 63 54.0
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 1.9e-11 72.0 63 52.4
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 2.4e-11 71.6 63 50.8
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-11 71.6 63 54.0
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 4.1e-11 70.9 63 52.4
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 7.0e-11 70.1 65 55.4
FAN02G2878 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.2e-11 69.7 65 55.4
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.2e-11 69.7 65 55.4
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-11 69.7 63 50.8
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-10 69.3 63 52.4
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-10 69.3 63 52.4
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-10 69.3 63 52.4
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-10 69.3 63 52.4
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-10 69.3 65 55.4
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 1.6e-10 68.9 65 55.4
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-10 68.6 63 50.8
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 3.5e-10 67.8 63 52.4
FvH4_4g16571 Fragaria vesca HOM05D000539 ORTHO05D000233 6.0e-10 67.0 63 49.2
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 6.0e-10 67.0 63 49.2
FvH4_2g07752 Fragaria vesca HOM05D000539 ORTHO05D000233 2.3e-09 65.1 63 49.2
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-09 65.1 63 49.2
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 6.6e-09 63.5 63 49.2
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 1.9e-08 62.0 63 50.8
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.8e-07 58.2 63 46.0
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 2.8e-07 58.2 63 39.7
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-07 57.0 63 42.9
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-07 56.6 63 46.0
FvH4_6g53023 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-06 55.8 36 63.9
FvH4_4g09772 Fragaria vesca HOM05D000539 ORTHO05D000233 1.8e-06 55.5 53 47.2
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 1.8e-06 55.5 63 41.3
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 3.1e-06 54.7 63 38.1
RcHm_v2.0_Chr6g0267111 Rosa chinensis HOM05D000539 ORTHO05D000233 3.1e-06 54.7 63 44.4
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 4.0e-06 54.3 63 41.3
RcHm_v2.0_Chr3g0462471 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-06 53.9 63 42.9
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-06 53.9 63 39.7
FAN18G3492 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.9e-06 53.1 63 44.4


User provided reference genes

Program Settings