Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.7e-101 370.9 190 100.0
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-75 286.2 146 97.9
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 7.1e-75 284.3 146 96.6
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.6e-74 283.1 146 96.6
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 7.8e-74 280.8 146 95.9
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 6.6e-73 277.7 146 95.9
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 4.6e-66 255.0 147 87.1
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 2.3e-65 252.7 146 84.2
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-62 243.4 183 76.0
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.7e-60 236.5 147 79.6
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 6.4e-60 234.6 146 77.4
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 1.4e-59 233.4 146 78.8
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.4e-59 233.4 146 78.8
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 3.2e-59 232.3 146 78.8
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 5.4e-59 231.5 146 76.7
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 7.1e-59 231.1 146 78.1
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 7.1e-59 231.1 146 78.1
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 9.3e-59 230.7 153 75.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 9.3e-59 230.7 147 79.6
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 9.3e-59 230.7 146 78.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.2e-58 230.3 150 77.3
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.6e-58 229.9 153 75.2
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.6e-58 229.9 153 75.2
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 2.7e-58 229.2 146 78.1
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 4.6e-58 228.4 146 76.7
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 6.0e-58 228.0 146 75.3
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 6.0e-58 228.0 146 77.4
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 6.0e-58 228.0 146 76.7
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 6.0e-58 228.0 153 74.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 6.0e-58 228.0 146 78.1
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 7.8e-58 227.6 146 76.7
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 1.3e-57 226.9 146 75.3
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.7e-57 226.5 146 77.4
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.7e-57 226.5 146 75.3
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.3e-57 226.1 146 76.0
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 2.3e-57 226.1 146 76.0
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 2.3e-57 226.1 146 76.7
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 3.0e-57 225.7 146 76.7
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 8.7e-57 224.2 146 76.0
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 1.1e-56 223.8 146 74.7
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.1e-56 223.8 146 76.0
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.5e-56 223.4 146 75.3
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.5e-56 222.6 146 75.3
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 3.3e-56 222.2 146 76.0
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 3.3e-56 222.2 146 74.0
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 4.3e-56 221.9 146 74.7
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 5.6e-56 221.5 146 74.7
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 5.6e-56 221.5 146 72.6
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 9.6e-56 220.7 146 74.7
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 1.3e-55 220.3 146 72.6
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.3e-55 220.3 146 71.9
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 2.8e-55 219.2 146 72.6
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 6.2e-55 218.0 148 69.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 1.1e-54 217.2 146 70.5
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.4e-54 216.9 146 71.2
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 1.8e-54 216.5 146 72.6
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.8e-54 216.5 146 72.6
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 3.1e-54 215.7 146 74.0
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 5.3e-54 214.9 153 69.9
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 6.9e-54 214.5 146 71.9
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.5e-53 213.4 146 72.6
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 2.0e-53 213.0 146 71.2
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 2.6e-53 212.6 144 68.1
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 3.4e-53 212.2 153 71.2
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 4.4e-53 211.8 146 69.9
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 4.4e-53 211.8 146 69.9
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 5.8e-53 211.5 146 69.2
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 5.8e-53 211.5 157 68.2
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 9.9e-53 210.7 146 69.2
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.3e-52 210.3 146 70.5
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 1.3e-52 210.3 153 70.6
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 1.7e-52 209.9 146 69.2
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 2.2e-52 209.5 146 69.9
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 2.2e-52 209.5 146 69.9
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.8e-52 208.8 146 69.2
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 3.8e-52 208.8 182 62.1
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 8.4e-52 207.6 152 69.7
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 8.4e-52 207.6 146 69.9
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 8.4e-52 207.6 146 68.5
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.1e-51 207.2 146 67.1
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.4e-51 206.8 146 66.4
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.4e-51 206.8 146 68.5
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.9e-51 206.5 150 70.0
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 3.2e-51 205.7 146 67.8
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.2e-51 205.3 146 68.5
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 4.2e-51 205.3 146 68.5
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 5.4e-51 204.9 146 69.2
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 7.1e-51 204.5 146 67.8
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 9.3e-51 204.1 146 69.9
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 9.3e-51 204.1 146 71.2
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 2.7e-50 202.6 156 66.7
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 7.9e-50 201.1 146 65.1
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 7.9e-50 201.1 158 63.9
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 6.6e-49 198.0 146 66.4
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 7.3e-48 194.5 146 66.4
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.8e-47 192.6 150 64.7
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 2.8e-47 192.6 152 63.8
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.8e-46 189.9 146 62.3
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 9.0e-46 187.6 157 64.3
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 9.0e-46 187.6 157 61.1
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.2e-45 187.2 146 63.7
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.3e-44 183.7 167 58.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.9e-44 182.6 146 68.5
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 4.9e-44 181.8 146 62.3
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 6.4e-44 181.4 146 66.4
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 2.8e-39 166.0 105 73.3
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 6.2e-39 164.9 200 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.3e-36 157.1 146 56.2
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.5e-35 152.9 145 55.2
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.2e-35 152.1 75 100.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 7.1e-35 151.4 144 55.6
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 6.3e-31 138.3 141 48.9
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 3.4e-29 132.5 148 43.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.3e-28 130.6 84 75.0
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.1e-27 127.5 79 78.5
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 5.3e-22 108.6 69 69.6
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 1.5e-21 107.1 67 79.1
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-21 106.7 68 69.1
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.1e-19 100.9 77 64.9
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 3.6e-18 95.9 62 72.6
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 6.1e-18 95.1 58 82.8
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 7.9e-18 94.7 139 46.0
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 5.1e-17 92.0 58 79.3
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 1.1e-16 90.9 140 37.1
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 3.7e-15 85.9 143 37.1
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 4.2e-11 72.4 141 34.8
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.2e-10 70.9 52 71.2
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.7e-07 60.5 91 39.6


User provided reference genes

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