Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3228 Fragaria x ananassa HOM05D000590 ORTHO05D001713 1.8e-72 275.8 135 100.0
FAN03G3291 Fragaria x ananassa HOM05D000590 ORTHO05D001713 3.7e-62 241.5 132 90.9
FAN06G4911 Fragaria x ananassa HOM05D000590 ORTHO05D001713 2.3e-59 232.3 133 87.2
FAN06G4986 Fragaria x ananassa HOM05D000590 ORTHO05D001713 2.3e-59 232.3 133 87.2
FAN10G0781 Fragaria x ananassa HOM05D000590 ORTHO05D001713 1.8e-40 169.5 230 47.0
FvH4_7g16370 Fragaria vesca HOM05D000590 ORTHO05D001713 2.0e-39 166.0 233 45.9
FAN01G2269 Fragaria x ananassa HOM05D000590 ORTHO05D001713 2.0e-39 166.0 232 47.0
FAN03G0672 Fragaria x ananassa HOM05D000590 ORTHO05D001713 3.2e-37 158.7 240 46.2
FAN10G2754 Fragaria x ananassa HOM05D000590 ORTHO05D001713 7.8e-36 154.1 232 44.0
RcHm_v2.0_Chr1g0359381 Rosa chinensis HOM05D000590 ORTHO05D001713 1.3e-27 126.7 264 38.6
Prupe.2G187600 Prunus persica HOM05D000590 ORTHO05D001713 1.5e-18 96.7 246 34.6
Glyma.07G056000 Glycine max HOM05D000590 ORTHO05D001713 2.4e-13 79.3 212 31.6
arahy.Tifrunner.gnm1.ann1.KMC0NT Arachis hypogaea HOM05D000590 ORTHO05D001713 9.3e-13 77.4 228 31.6
arahy.Tifrunner.gnm1.ann1.TXM5HR Arachis hypogaea HOM05D000590 ORTHO05D001713 1.2e-12 77.0 228 31.6
Lj1g0002791 Lotus japonicus HOM05D000590 ORTHO05D001713 4.6e-12 75.1 176 31.8
Medtr8g027725 Medicago truncatula HOM05D000590 ORTHO05D001713 1.0e-11 73.9 167 31.1
Haze_15658 Corylus avellana HOM05D000590 ORTHO05D001713 3.9e-11 72.0 255 29.4
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 8.7e-11 70.9 255 29.0
Phvul.010G113900 Phaseolus vulgaris HOM05D000590 ORTHO05D001713 1.1e-10 70.5 208 29.8
MD01G1080200 Malus domestica HOM05D000590 ORTHO05D001713 1.5e-10 70.1 271 27.7
VMungo0331G1369 Vigna mungo HOM05D000590 ORTHO05D001713 1.5e-10 70.1 208 30.3
CsaV3_6G007140 Cucumis sativus L. HOM05D000590 ORTHO05D001713 4.3e-10 68.6 262 26.3
MELO3C022413.2 Cucumis melo HOM05D000590 ORTHO05D001713 5.6e-10 68.2 263 26.6
Psat4g160800 Pisum sativum HOM05D000590 ORTHO05D001713 9.6e-10 67.4 249 27.3
CARHR172070 Cardamine hirsuta HOM05D000590 ORTHO05D001713 1.6e-09 66.6 202 26.2
QL04p061125 Quercus lobata HOM05D000590 ORTHO05D001713 1.6e-09 66.6 233 29.6
arahy.Tifrunner.gnm1.ann1.6VV6NG Arachis hypogaea HOM05D000590 ORTHO05D001713 4.8e-09 65.1 161 33.5
Sed0026222 Sechium edule HOM05D000590 ORTHO05D001713 4.8e-09 65.1 248 27.4
Nitab4.5_0004999g0030 Nicotiana tabacum HOM05D000590 ORTHO05D001713 6.2e-09 64.7 247 28.7
Ca_23538_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 1.8e-08 63.2 242 28.9
Glyma.16G024900 Glycine max HOM05D000590 ORTHO05D001713 3.1e-08 62.4 99 37.4
CiPaw.02G040800 Carya illinoinensis HOM05D000590 ORTHO05D001713 4.0e-08 62.0 85 44.7
TWI23G0304 Tripterygium wilfordii HOM05D000590 ORTHO05D001713 4.0e-08 62.0 270 26.7
Potri.002G170600 Populus trichocarpa HOM05D000590 ORTHO05D001713 1.5e-07 60.1 37 62.2
Potri.014G098400 Populus trichocarpa HOM05D000590 ORTHO05D001713 1.5e-07 60.1 32 75.0
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 1.5e-07 60.1 32 75.0
TWI14G0749 Tripterygium wilfordii HOM05D000590 ORTHO05D001713 1.5e-07 60.1 41 58.5
Nitab4.5_0000838g0240 Nicotiana tabacum HOM05D000590 ORTHO05D001713 2.0e-07 59.7 247 27.5
Sabra02G0141800 Salix brachista HOM05D000590 ORTHO05D001713 2.0e-07 59.7 37 62.2
Atru.chr5.662 Acer truncatum HOM05D000590 ORTHO05D001713 2.6e-07 59.3 60 46.7
Lj3g0021311 Lotus japonicus HOM05D000590 ORTHO05D001713 2.6e-07 59.3 32 68.8
Ciclev10018749m.g Citrus clementina HOM05D000590 ORTHO05D001713 3.4e-07 58.9 238 24.4
HanXRQChr16g0524131 Helianthus annuus HOM05D000590 ORTHO05D001713 3.4e-07 58.9 181 29.8
Thecc.01G343000 Theobroma cacao HOM05D000590 ORTHO05D001713 4.5e-07 58.5 32 65.6
Ciclev10020309m.g Citrus clementina HOM05D000590 ORTHO05D001713 5.8e-07 58.2 63 42.9
Cpa.g.sc96.10 Carica papaya HOM05D000590 ORTHO05D001713 7.6e-07 57.8 38 63.2
CDE04G1416 Ceratophyllum demersum HOM05D000590 ORTHO05D001713 1.0e-06 57.4 60 46.7
GSVIVG01027118001 Vitis vinifera HOM05D000590 ORTHO05D001713 1.0e-06 57.4 231 26.0
CiPaw.02G040600 Carya illinoinensis HOM05D000590 ORTHO05D001713 1.3e-06 57.0 119 34.5
Ca_09505_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 1.3e-06 57.0 231 26.8
COL.COLO4_06290 Corchorus olitorius HOM05D000590 ORTHO05D001713 1.3e-06 57.0 31 64.5
Gohir.A12G112000 Gossypium hirsutum HOM05D000590 ORTHO05D001713 1.3e-06 57.0 41 56.1
Gohir.D12G115600 Gossypium hirsutum HOM05D000590 ORTHO05D001713 1.3e-06 57.0 41 56.1
Gorai.008G125100 Gossypium raimondii HOM05D000590 ORTHO05D001713 1.3e-06 57.0 41 56.1
Aqoxy5G04235 Aquilegia oxysepala HOM05D000590 ORTHO05D001713 1.7e-06 56.6 38 57.9
MBI06_g08469_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D001713 1.7e-06 56.6 32 65.6
Manes.05G023250 Manihot esculenta HOM05D000590 ORTHO05D001713 1.7e-06 56.6 32 62.5
CDE03G0396 Ceratophyllum demersum HOM05D000590 ORTHO05D001713 2.2e-06 56.2 60 46.7
Peaxi162Scf00786g00322 Petunia axillaris HOM05D000590 ORTHO05D001713 2.2e-06 56.2 36 58.3
PGR031G1051 Punica granatum HOM05D000590 ORTHO05D001713 2.2e-06 56.2 78 38.5
Duzib133G0676 Durio zibethinus HOM05D000590 ORTHO05D001713 2.9e-06 55.8 38 60.5
RcHm_v2.0_Chr2g0117111 Rosa chinensis HOM05D000590 ORTHO05D001713 2.9e-06 55.8 94 52.1
TAR375G0739 Trochodendron aralioides HOM05D000590 ORTHO05D001713 2.9e-06 55.8 38 65.8
CARHR235610 Cardamine hirsuta HOM05D000590 ORTHO05D001713 3.8e-06 55.5 218 26.1
Nn1g00224 Nelumbo nucifera HOM05D000590 ORTHO05D001713 3.8e-06 55.5 38 63.2
Nn3g19005 Nelumbo nucifera HOM05D000590 ORTHO05D001713 3.8e-06 55.5 38 63.2
TAR636G2428 Trochodendron aralioides HOM05D000590 ORTHO05D001713 3.8e-06 55.5 38 63.2
Lalb_Chr15g0076261 Lupinus albus HOM05D000590 ORTHO05D001713 4.9e-06 55.1 38 63.2
TAR629G1215 Trochodendron aralioides HOM05D000590 ORTHO05D001713 4.9e-06 55.1 38 60.5
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.9e-06 55.1 35 60.0
Actinidia28504 Actinidia chinensis HOM05D000590 ORTHO05D001713 6.5e-06 54.7 257 26.5
Cc02_g39320 Coffea canephora HOM05D000590 ORTHO05D001713 6.5e-06 54.7 67 38.8
Eucgr.D02372 Eucalyptus grandis HOM05D000590 ORTHO05D001713 8.4e-06 54.3 32 53.1


User provided reference genes

Program Settings