Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 3.1e-94 349.0 255 100.0
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 8.3e-87 324.3 264 91.3
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.5e-85 318.5 245 88.2
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 7.5e-80 301.2 254 90.6
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 1.3e-71 273.9 254 87.8
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 5.4e-54 215.3 153 84.3
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 5.8e-48 195.3 110 88.2
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.3e-47 194.1 109 87.2
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 3.5e-37 159.5 110 71.8
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 1.8e-33 147.1 109 67.9
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 5.3e-33 145.6 109 67.9
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 6.4e-23 112.1 112 56.2
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 1.9e-22 110.5 127 50.4
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 7.1e-22 108.6 113 54.0
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.6e-21 107.5 92 60.9
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 1.6e-21 107.5 88 61.4
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 3.5e-21 106.3 93 58.1
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 3.5e-21 106.3 110 56.4
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 6.0e-21 105.5 104 52.9
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 7.9e-21 105.1 118 51.7
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 3.0e-20 103.2 88 60.2
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 5.1e-20 102.4 110 50.9
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 5.1e-20 102.4 110 52.7
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 6.7e-20 102.1 125 45.6
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 1.1e-19 101.3 125 47.2
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 1.5e-19 100.9 115 49.6
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 3.3e-19 99.8 124 46.0
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 4.3e-19 99.4 121 46.3
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 4.3e-19 99.4 122 45.9
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 7.4e-19 98.6 99 51.5
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 9.6e-19 98.2 97 51.5
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 9.6e-19 98.2 89 61.8
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 1.3e-18 97.8 125 47.2
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 4.8e-18 95.9 90 58.9
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 4.8e-18 95.9 90 58.9
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 4.8e-18 95.9 89 59.6
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 6.2e-18 95.5 120 45.8
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 6.2e-18 95.5 98 52.0
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 6.2e-18 95.5 126 46.8
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 8.1e-18 95.1 99 50.5
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 8.1e-18 95.1 112 50.9
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 8.1e-18 95.1 88 55.7
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 1.4e-17 94.4 109 46.8
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 1.4e-17 94.4 116 49.1
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 1.8e-17 94.0 93 52.7
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 1.8e-17 94.0 99 51.5
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 1.8e-17 94.0 92 52.2
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 2.4e-17 93.6 102 53.9
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 2.4e-17 93.6 104 51.0
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 3.1e-17 93.2 87 57.5
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 3.1e-17 93.2 98 52.0
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 3.1e-17 93.2 98 52.0
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 3.1e-17 93.2 88 58.0
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 3.1e-17 93.2 102 50.0
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 4.0e-17 92.8 98 48.0
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 4.0e-17 92.8 103 48.5
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 4.0e-17 92.8 88 58.0
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 5.3e-17 92.4 63 71.4
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 5.3e-17 92.4 101 49.5
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 6.9e-17 92.0 85 56.5
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 6.9e-17 92.0 101 49.5
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 6.9e-17 92.0 86 55.8
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 6.9e-17 92.0 87 55.2
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 6.9e-17 92.0 115 45.2
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.5e-16 90.9 93 51.6
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 2.0e-16 90.5 93 52.7
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 2.0e-16 90.5 85 56.5
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 2.6e-16 90.1 93 51.6
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 2.6e-16 90.1 114 47.4
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 4.5e-16 89.4 87 56.3
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 4.5e-16 89.4 112 43.8
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 4.5e-16 89.4 88 53.4
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 5.8e-16 89.0 92 50.0
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 5.8e-16 89.0 87 52.9
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 5.8e-16 89.0 87 51.7
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 5.8e-16 89.0 85 52.9
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 7.6e-16 88.6 112 45.5
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.0e-15 88.2 113 47.8
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 1.0e-15 88.2 92 55.4
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 1.0e-15 88.2 110 45.5
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 1.3e-15 87.8 85 54.1
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.3e-15 87.8 85 54.1
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.3e-15 87.8 87 56.3
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.7e-15 87.4 88 52.3
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 1.7e-15 87.4 85 54.1
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 2.9e-15 86.7 89 51.7
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 3.8e-15 86.3 113 44.2
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 4.9e-15 85.9 116 44.0
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.9e-15 85.9 87 50.6
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 4.9e-15 85.9 92 50.0
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 4.9e-15 85.9 116 41.4
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 4.9e-15 85.9 114 45.6
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 6.5e-15 85.5 121 44.6
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 8.4e-15 85.1 113 44.2
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 1.4e-14 84.3 95 49.5
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.9e-14 84.0 85 52.9
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.9e-14 84.0 85 52.9
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 1.9e-14 84.0 116 45.7
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 3.2e-14 83.2 84 51.2
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 5.5e-14 82.4 87 47.1
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 9.3e-14 81.6 61 62.3
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 9.3e-14 81.6 99 50.5
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 7.9e-13 78.6 116 42.2
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 7.9e-13 78.6 94 43.6
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.0e-12 78.2 94 43.6
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.3e-12 77.8 94 42.6
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 1.8e-12 77.4 89 51.7
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 3.0e-12 76.6 83 51.8
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 3.0e-12 76.6 84 46.4
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 3.0e-12 76.6 60 65.0
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 5.7e-11 72.4 83 44.6
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 2.4e-09 67.0 60 50.0
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.0e-07 61.6 92 41.3
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 2.9e-07 60.1 120 35.8
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 7.2e-06 55.5 64 43.8
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 9.3e-06 55.1 60 50.0
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 9.3e-06 55.1 85 37.6


User provided reference genes

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