Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3013 Fragaria x ananassa HOM05D020842 ORTHO05D035472 3.5e-140 501.5 239 100.0
FAN10G0214 Fragaria x ananassa HOM05D020842 ORTHO05D035472 5.6e-138 494.2 238 98.3
FvH4_1g15100 Fragaria vesca HOM05D020842 ORTHO05D035472 4.8e-97 358.2 209 85.2
FvH4_1g17951 Fragaria vesca HOM05D020842 ORTHO05D002052 2.4e-32 143.3 169 51.5
RcHm_v2.0_Chr3g0475711 Rosa chinensis HOM05D002687 ORTHO05D002052 5.5e-24 115.5 168 39.3
Prupe.7G097000 Prunus persica HOM05D002687 ORTHO05D002052 6.7e-22 108.6 155 43.2
FvH4_6g20177 Fragaria vesca HOM05D002687 ORTHO05D002052 1.9e-21 107.1 168 36.9
FAN14G3199 Fragaria x ananassa HOM05D029328 ORTHO05D002052 1.9e-21 107.1 168 36.9
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 4.0e-19 99.4 155 40.6
FAN28G0212 Fragaria x ananassa HOM05D020842 ORTHO05D203444 6.9e-19 98.6 59 84.7
MD14G1037500 Malus domestica HOM05D002687 ORTHO05D002052 9.0e-19 98.2 154 40.9
FvH4_1g17953 Fragaria vesca HOM05D020842 ORTHO05D197298 2.6e-18 96.7 108 58.3
FAN24G3102 Fragaria x ananassa HOM05D031442 ORTHO05D046342 4.9e-17 92.4 169 37.9
FvH4_2g25004 Fragaria vesca HOM05D031442 ORTHO05D045543 1.1e-16 91.3 200 38.0
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.2e-15 87.8 156 40.4
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 1.6e-15 87.4 170 35.3
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.7e-15 86.7 180 31.7
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 4.6e-15 85.9 188 34.6
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.6e-15 85.9 161 32.9
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 6.7e-14 82.0 115 42.6
Cpa.g.sc104.46 Carica papaya HOM05D002687 ORTHO05D002052 3.3e-13 79.7 183 32.8
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 6.3e-12 75.5 146 28.8
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.1e-11 74.7 161 32.3
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.1e-11 74.7 161 32.3
FAN24G1312 Fragaria x ananassa HOM05D009841 ORTHO05D045543 1.4e-11 74.3 154 38.3
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.4e-11 74.3 166 27.7
FvH4_2g25002 Fragaria vesca HOM05D031442 ORTHO05D046342 9.0e-11 71.6 154 34.4
FAN14G2698 Fragaria x ananassa HOM05D029328 ORTHO05D002052 9.0e-11 71.6 187 32.1
Manes.09G046600 Manihot esculenta HOM05D002687 ORTHO05D002052 9.0e-11 71.6 156 32.1
FvH4_6g08860 Fragaria vesca HOM05D029328 ORTHO05D046136 1.5e-10 70.9 187 32.1
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 2.6e-10 70.1 173 26.0
FAN05G1713 Fragaria x ananassa HOM05D029328 ORTHO05D046136 3.4e-10 69.7 187 32.1
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 3.4e-10 69.7 114 36.0
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 4.5e-10 69.3 177 28.2
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 4.5e-10 69.3 177 28.2
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 5.9e-10 68.9 114 31.6
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 1.0e-09 68.2 133 28.6
CSS0036580 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 1.7e-09 67.4 180 28.9
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.7e-09 67.4 147 29.9
RcHm_v2.0_Chr1g0336471 Rosa chinensis HOM05D025439 ORTHO05D022631 2.2e-09 67.0 182 25.8
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.2e-09 67.0 178 28.1
Aqoxy1G00685 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 2.9e-09 66.6 180 28.3
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.8e-09 66.2 148 28.4
AUR62031792 Chenopodium quinoa HOM05D002687 ORTHO05D002052 5.0e-09 65.9 153 30.7
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 5.0e-09 65.9 170 27.6
ATR0772G197 Amborella trichopoda HOM05D002687 ORTHO05D002052 6.5e-09 65.5 159 27.7
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 6.5e-09 65.5 116 28.4
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 6.5e-09 65.5 180 25.0
PGSC0003DMG400005897 Solanum tuberosum HOM05D002687 ORTHO05D002052 6.5e-09 65.5 115 31.3
Nitab4.5_0000380g0140 Nicotiana tabacum HOM05D002687 ORTHO05D002052 8.5e-09 65.1 176 26.7
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 1.1e-08 64.7 159 25.8
DCAR_013440 Daucus carota HOM05D002687 ORTHO05D002052 1.9e-08 63.9 167 28.7
Hma1.2p1_0051F.1_g029590 Hydrangea macrophylla HOM05D000733 ORTHO05D000649 1.9e-08 63.9 147 32.7
Nitab4.5_0000657g0070 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.9e-08 63.9 176 26.7
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 2.5e-08 63.5 115 34.8
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 3.2e-08 63.2 115 28.7
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 3.2e-08 63.2 115 30.4
FAN10G3605 Fragaria x ananassa HOM05D020649 ORTHO05D002052 4.2e-08 62.8 171 32.7
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 4.2e-08 62.8 115 30.4
Ciclev10012623m.g Citrus clementina HOM05D002687 ORTHO05D002052 5.5e-08 62.4 165 29.7
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 7.2e-08 62.0 165 28.5
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 7.2e-08 62.0 165 28.5
Eucgr.J00543 Eucalyptus grandis HOM05D002687 ORTHO05D002052 7.2e-08 62.0 152 28.3
Aa31LG5G8690 Aethionema arabicum HOM05D002687 ORTHO05D002052 1.6e-07 60.8 174 24.1
FAN11G1248 Fragaria x ananassa HOM05D002687 ORTHO05D002052 1.6e-07 60.8 190 25.3
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 4.6e-07 59.3 137 28.5
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 6.1e-07 58.9 177 24.9
Dinv31751 Davidia involucrata HOM05D002687 ORTHO05D002052 7.9e-07 58.5 147 28.6
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 7.9e-07 58.5 177 24.3
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 7.9e-07 58.5 177 24.3
FAN19G0607 Fragaria x ananassa HOM05D015912 ORTHO05D029635 1.0e-06 58.2 161 29.2
Ca_09050_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 1.4e-06 57.8 191 27.7
COL.COLO4_22662 Corchorus olitorius HOM05D002687 ORTHO05D002052 1.4e-06 57.8 145 26.9
Medtr7g106100 Medicago truncatula HOM05D002687 ORTHO05D002052 1.4e-06 57.8 116 34.5
Rhsim13G0101800 Rhododendron simsii HOM05D000733 ORTHO05D000649 1.4e-06 57.8 133 27.1
FvH4_1g21610 Fragaria vesca HOM05D015912 ORTHO05D029635 1.8e-06 57.4 161 29.2
Sp4g10070 Schrenkiella parvula HOM05D002687 ORTHO05D002052 1.8e-06 57.4 181 23.8
Cc01_g10170 Coffea canephora HOM05D000980 ORTHO05D000649 3.0e-06 56.6 146 30.1
AT2G27260 Arabidopsis thaliana HOM05D002687 ORTHO05D002052 3.9e-06 56.2 187 24.1
Oeu035584.1 Olea europaea HOM05D002687 ORTHO05D002052 5.1e-06 55.8 140 26.4
Nn6g34711 Nelumbo nucifera HOM05D002687 ORTHO05D002052 6.7e-06 55.5 114 27.2
Glyma.10G080800 Glycine max HOM05D008136 ORTHO05D002052 8.8e-06 55.1 148 27.0


User provided reference genes

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