Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.1e-66 256.5 136 100.0
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 1.2e-57 226.5 135 89.6
FAN03G2753 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.7e-51 206.1 132 84.8
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.1e-51 204.5 129 83.7
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 1.3e-49 199.9 135 81.5
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.0e-48 193.7 129 80.6
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.7e-43 177.2 111 84.7
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 5.7e-26 121.3 134 58.2
FAN01G2981 Fragaria x ananassa HOM05D008269 ORTHO05D010153 4.2e-21 105.1 77 72.7
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 2.5e-13 79.3 144 41.0
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 9.4e-13 77.4 139 39.6
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 1.6e-12 76.6 141 42.6
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 2.1e-12 76.3 134 38.8
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 2.7e-12 75.9 138 39.9
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 7.9e-12 74.3 135 38.5
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 1.8e-11 73.2 143 39.9
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 2.3e-11 72.8 136 39.7
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.3e-11 72.8 136 39.0
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 3.9e-11 72.0 138 39.9
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 5.1e-11 71.6 134 41.8
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 6.7e-11 71.2 148 37.8
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 1.1e-10 70.5 142 42.3
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 3.3e-10 68.9 138 39.1
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 3.3e-10 68.9 136 38.2
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 5.7e-10 68.2 150 39.3
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 6.3e-09 64.7 137 36.5
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 6.3e-09 64.7 140 38.6
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 8.2e-09 64.3 135 40.0
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 9.1e-08 60.8 140 34.3
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 9.1e-08 60.8 150 38.0
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.2e-07 60.5 132 37.1
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 1.5e-07 60.1 160 33.1
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 2.0e-07 59.7 134 35.8
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 3.4e-07 58.9 134 33.6
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 4.5e-07 58.5 136 34.6
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 5.9e-07 58.2 135 35.6
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 5.9e-07 58.2 135 31.1
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 1.3e-06 57.0 137 32.1
Thecc.03G030800 Theobroma cacao HOM05D008269 ORTHO05D010153 1.3e-06 57.0 135 33.3
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 5.0e-06 55.1 135 34.8
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 6.5e-06 54.7 134 32.1
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 6.5e-06 54.7 145 31.7


User provided reference genes

Program Settings