Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.9e-87 324.7 158 100.0
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.7e-86 320.9 158 98.1
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 9.0e-84 313.5 158 96.8
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.9e-82 308.5 158 96.2
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.9e-82 308.5 158 96.2
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 3.8e-82 308.1 158 94.9
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 1.9e-81 305.8 158 94.9
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 4.4e-62 241.5 159 75.5
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.6e-59 233.0 162 71.6
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.6e-56 223.0 131 80.9
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 5.2e-55 218.0 167 63.5
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 6.7e-55 217.6 133 74.4
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 6.7e-55 217.6 145 74.5
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 1.1e-54 216.9 164 67.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 3.3e-54 215.3 124 79.0
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 7.5e-54 214.2 136 75.7
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 9.7e-54 213.8 126 81.0
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.3e-53 213.4 142 73.2
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.3e-53 213.4 142 73.2
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 1.3e-53 213.4 111 86.5
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 4.8e-53 211.5 137 75.9
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 4.8e-53 211.5 137 78.1
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.8e-53 211.5 167 64.1
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 4.8e-53 211.5 163 64.4
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 1.8e-52 209.5 111 86.5
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.4e-52 209.1 149 68.5
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 4.1e-52 208.4 149 69.8
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 7.0e-52 207.6 123 80.5
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 9.1e-52 207.2 123 79.7
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 9.1e-52 207.2 123 79.7
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 1.2e-51 206.8 167 62.9
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.6e-51 206.5 142 71.1
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 2.7e-51 205.7 142 71.8
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 4.5e-51 204.9 141 71.6
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.5e-51 204.9 163 64.4
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.3e-50 203.4 123 78.9
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 2.2e-50 202.6 111 82.9
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 2.2e-50 202.6 160 67.5
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 2.9e-50 202.2 127 76.4
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 2.9e-50 202.2 152 63.8
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 3.8e-50 201.8 141 70.9
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 3.8e-50 201.8 159 64.8
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 3.8e-50 201.8 123 78.9
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 5.0e-50 201.4 161 64.6
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 6.5e-50 201.1 114 79.8
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 8.5e-50 200.7 129 78.3
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 1.5e-49 199.9 146 67.1
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 1.9e-49 199.5 122 77.0
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 3.2e-49 198.7 111 81.1
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 3.2e-49 198.7 162 61.7
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 4.2e-49 198.4 119 76.5
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 4.2e-49 198.4 137 71.5
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 4.2e-49 198.4 156 64.1
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 4.2e-49 198.4 152 65.8
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 5.5e-49 198.0 162 62.3
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 7.2e-49 197.6 123 74.0
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 7.2e-49 197.6 123 74.0
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 7.2e-49 197.6 119 74.8
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 7.2e-49 197.6 110 80.9
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 7.2e-49 197.6 110 80.9
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 7.2e-49 197.6 150 66.7
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 9.4e-49 197.2 146 66.4
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 1.2e-48 196.8 111 79.3
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 1.6e-48 196.4 121 76.0
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 1.6e-48 196.4 136 69.9
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 2.1e-48 196.1 101 84.2
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 3.6e-48 195.3 136 68.4
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 8.0e-48 194.1 109 78.0
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.0e-47 193.7 136 67.6
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.4e-47 193.4 112 77.7
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 1.4e-47 193.4 97 86.6
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.8e-47 193.0 159 61.6
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.8e-47 193.0 141 66.7
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 1.8e-47 193.0 195 53.8
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 3.0e-47 192.2 124 69.4
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 6.8e-47 191.0 146 65.1
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 6.8e-47 191.0 112 77.7
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 8.8e-47 190.7 168 60.1
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 8.8e-47 190.7 153 62.7
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 8.8e-47 190.7 96 88.5
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 8.8e-47 190.7 112 75.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 1.5e-46 189.9 105 79.0
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 1.5e-46 189.9 153 60.8
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.0e-46 189.5 134 67.9
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 2.6e-46 189.1 102 82.4
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 2.6e-46 189.1 195 53.3
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 3.4e-46 188.7 135 66.7
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 3.4e-46 188.7 96 83.3
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 3.4e-46 188.7 162 59.9
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 4.4e-46 188.3 136 65.4
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 4.4e-46 188.3 144 64.6
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 7.5e-46 187.6 130 68.5
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 7.5e-46 187.6 137 65.7
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 9.8e-46 187.2 111 72.1
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 9.8e-46 187.2 112 73.2
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 9.8e-46 187.2 162 59.3
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 1.7e-45 186.4 161 58.4
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 4.8e-45 184.9 103 81.6
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 2.7e-43 179.1 244 43.4
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 2.7e-43 179.1 109 73.4
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 5.9e-43 177.9 97 81.4
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 2.1e-40 169.5 92 79.3
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 2.1e-40 169.5 117 66.7
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.3e-37 160.2 91 75.8
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 7.0e-36 154.5 88 75.0
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.0e-35 152.9 139 59.0
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 5.9e-35 151.4 131 61.1
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 7.7e-35 151.0 112 67.9
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 2.5e-33 146.0 111 65.8
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.6e-32 143.3 89 74.2
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 3.6e-32 142.1 102 72.5
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 6.8e-31 137.9 110 55.5
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.5e-25 120.2 65 80.0
RcHm_v2.0_Chr1g0379751 Rosa chinensis HOM05D006803 ORTHO05D008552 1.9e-25 119.8 81 79.0
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 4.0e-23 112.1 76 65.8
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 4.9e-21 105.1 66 69.7
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 3.2e-20 102.4 66 69.7
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 4.1e-12 75.5 35 100.0
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 2.7e-11 72.8 36 88.9


User provided reference genes

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