Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.4e-45 184.5 86 100.0
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 1.4e-43 179.1 86 98.8
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 1.9e-43 178.7 86 96.5
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 9.1e-38 159.8 77 96.1
FAN03G0373 Fragaria x ananassa HOM05D008287 ORTHO05D010110 6.5e-36 153.7 78 96.2
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 1.3e-31 139.4 86 77.9
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 9.1e-14 80.1 90 48.9
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 2.7e-13 78.6 98 44.9
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 2.9e-12 75.1 92 50.0
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 3.8e-12 74.7 73 45.2
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 1.1e-11 73.2 76 46.1
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 1.1e-11 73.2 87 46.0
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 2.5e-11 72.0 76 47.4
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.3e-11 71.6 76 46.1
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 2.1e-10 68.9 97 46.4
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 1.8e-09 65.9 73 53.4
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 2.3e-09 65.5 56 55.4
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 6.8e-09 63.9 90 42.2
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 1.5e-08 62.8 76 48.7
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 1.5e-08 62.8 74 44.6
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 1.5e-08 62.8 73 45.2
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 2.0e-08 62.4 69 44.9
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 2.6e-08 62.0 52 59.6
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 3.4e-08 61.6 49 61.2
Aa31sc101G40 Aethionema arabicum HOM05D013386 ORTHO05D010110 4.4e-08 61.2 86 41.9
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 4.4e-08 61.2 94 38.3
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 4.4e-08 61.2 52 59.6
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 9.8e-08 60.1 86 40.7
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 9.8e-08 60.1 54 55.6
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 9.8e-08 60.1 52 57.7
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 1.3e-07 59.7 44 65.9
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 1.3e-07 59.7 52 59.6
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.7e-07 59.3 86 41.9
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.7e-07 59.3 39 66.7
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.7e-07 59.3 39 66.7
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.2e-07 58.9 81 39.5
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 2.2e-07 58.9 80 38.8
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 2.2e-07 58.9 80 38.8
PGR142G4013 Punica granatum HOM05D008287 ORTHO05D010110 2.8e-07 58.5 32 78.1
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 4.9e-07 57.8 32 75.0
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 4.9e-07 57.8 59 54.2
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 4.9e-07 57.8 32 68.8
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 6.3e-07 57.4 92 38.0
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 6.3e-07 57.4 32 71.9
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 8.3e-07 57.0 60 46.7
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.8e-06 55.8 36 63.9
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 2.4e-06 55.5 56 46.4
CANSAT56G0495 Cannabis sativa HOM05D008287 ORTHO05D010110 3.1e-06 55.1 90 36.7
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 3.1e-06 55.1 94 36.2
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 3.1e-06 55.1 40 60.0
CSS0035042 Camellia sinensis var. sinensis HOM05D008287 ORTHO05D010110 4.1e-06 54.7 32 71.9


User provided reference genes

Program Settings