Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.7e-129 464.9 241 100.0
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.7e-129 464.9 241 100.0
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-124 448.4 241 96.7
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 4.7e-124 448.0 241 96.7
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.0e-122 442.6 241 95.4
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.0e-122 442.6 241 95.4
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 8.9e-107 390.6 245 86.9
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.6e-92 343.2 238 75.6
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 5.4e-88 328.2 239 73.6
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 9.5e-85 317.4 240 73.8
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 2.1e-79 299.7 237 67.5
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 8.6e-78 294.3 229 68.1
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.8e-75 286.6 231 69.7
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.4e-74 282.0 210 72.4
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 6.4e-73 278.1 245 63.3
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 3.5e-71 272.3 241 66.4
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 7.8e-71 271.2 243 63.8
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 2.3e-70 269.6 236 65.3
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 5.6e-69 265.0 245 62.4
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 7.3e-69 264.6 222 66.7
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.6e-68 263.5 230 63.5
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 3.6e-68 262.3 229 60.7
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.1e-67 260.8 243 63.0
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.4e-67 260.4 240 60.8
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 5.3e-67 258.5 240 60.8
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 3.4e-66 255.8 245 60.4
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 5.8e-66 255.0 242 60.7
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 5.8e-66 255.0 210 66.7
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 9.9e-66 254.2 243 58.8
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 9.9e-66 254.2 223 64.6
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.2e-65 253.1 238 58.8
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 2.2e-65 253.1 237 62.9
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.4e-64 249.6 250 56.8
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.6e-63 246.9 259 56.8
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 2.1e-63 246.5 248 58.9
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.5e-63 245.7 219 62.6
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 7.9e-63 244.6 244 58.2
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.0e-62 244.2 216 63.9
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.7e-62 243.4 251 59.4
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 5.1e-62 241.9 215 63.7
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 8.7e-62 241.1 239 58.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.9e-61 240.0 236 60.2
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 3.3e-61 239.2 236 56.4
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.6e-60 236.9 216 57.9
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 1.4e-59 233.8 218 60.1
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 6.9e-59 231.5 207 59.9
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 9.0e-59 231.1 228 57.0
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 9.0e-59 231.1 282 52.8
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.2e-58 230.7 242 54.1
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 1.5e-58 230.3 271 52.4
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 3.4e-58 229.2 251 55.0
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 5.8e-58 228.4 183 71.0
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 5.8e-58 228.4 237 59.1
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 7.6e-58 228.0 248 53.2
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.7e-57 226.9 206 60.2
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 2.9e-57 226.1 241 53.1
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 8.4e-57 224.6 223 56.1
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.1e-56 224.2 243 52.3
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.1e-56 224.2 243 52.3
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.9e-56 223.4 252 50.8
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 4.2e-56 222.2 286 50.0
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 4.2e-56 222.2 230 53.0
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 9.3e-56 221.1 225 56.4
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 9.3e-56 221.1 271 51.7
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 2.1e-55 219.9 234 53.8
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 6.0e-55 218.4 247 53.4
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.0e-54 217.6 232 53.0
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 8.7e-54 214.5 199 56.8
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.9e-53 213.4 242 54.1
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 7.4e-53 211.5 208 54.8
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.8e-52 209.5 243 53.1
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 1.4e-51 207.2 193 59.6
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.4e-51 207.2 225 52.4
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.4e-51 207.2 204 57.8
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 2.4e-51 206.5 250 50.4
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 5.3e-51 205.3 224 52.7
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 9.0e-51 204.5 238 52.1
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 9.0e-51 204.5 204 57.4
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.5e-50 203.8 250 49.6
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 7.6e-50 201.4 221 54.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.0e-49 201.1 197 55.8
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.3e-49 200.7 228 48.2
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.5e-48 196.4 193 53.9
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 2.5e-48 196.4 290 42.8
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 3.5e-47 192.6 167 60.5
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.0e-46 191.0 151 63.6
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 2.3e-46 189.9 234 47.9
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 9.6e-45 184.5 228 48.7
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 2.1e-44 183.3 131 69.5
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 6.3e-44 181.8 198 54.0
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 8.2e-44 181.4 198 53.5
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 6.9e-43 178.3 279 44.1
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 2.9e-41 172.9 171 55.0
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.8e-38 163.7 186 52.2
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 3.9e-38 162.5 240 43.8
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 6.3e-36 155.2 223 42.6
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 4.1e-35 152.5 169 52.7
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.0e-34 150.2 168 50.6
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 2.0e-34 150.2 262 38.5
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 3.8e-33 146.0 219 43.4
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 6.5e-33 145.2 154 53.9
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 4.4e-29 132.5 190 45.3
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 3.4e-26 122.9 70 85.7
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 7.7e-26 121.7 198 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 3.8e-25 119.4 138 44.9
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 3.8e-25 119.4 199 40.2
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 6.5e-25 118.6 135 48.9
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.1e-24 117.9 95 63.2
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 1.9e-24 117.1 145 51.7
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 9.1e-19 98.2 94 63.8
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 1.9e-16 90.5 152 37.5
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 4.2e-16 89.4 127 48.0
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 2.1e-15 87.0 127 47.2
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 4.4e-13 79.3 119 47.9
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 5.7e-13 79.0 50 70.0
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 7.5e-13 78.6 186 34.9
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 3.7e-12 76.3 44 86.4
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 3.1e-11 73.2 82 57.3
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.6e-10 70.9 87 43.7
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 2.9e-09 66.6 42 64.3
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 1.4e-06 57.8 93 43.0
QL10p024490 Quercus lobata HOM05D006369 ORTHO05D007764 1.8e-06 57.4 51 62.7
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 5.2e-06 55.8 156 34.0


User provided reference genes

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