Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.1e-207 724.2 364 100.0
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.2e-195 686.4 364 96.2
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 8.5e-186 653.7 364 92.3
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 1.4e-185 652.9 345 96.2
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.5e-166 589.7 361 85.0
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 9.7e-166 587.0 313 95.8
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 2.1e-144 516.2 364 72.8
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 5.8e-142 508.1 365 71.5
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 8.0e-136 487.6 356 72.2
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.2e-126 457.2 358 63.7
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 6.4e-125 451.4 366 64.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.4e-124 449.5 361 63.7
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.9e-121 439.9 369 60.4
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.3e-121 438.7 361 62.6
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.8e-119 433.3 360 62.2
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.5e-118 430.3 356 62.1
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.6e-118 429.5 360 61.4
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 4.4e-118 428.7 370 61.9
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 7.1e-116 421.4 353 60.3
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 7.1e-116 421.4 358 59.5
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 2.1e-115 419.9 353 61.8
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 2.7e-115 419.5 359 59.6
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.3e-114 417.2 354 59.9
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.3e-114 416.4 378 59.3
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 3.0e-114 416.0 353 60.6
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 3.9e-114 415.6 362 58.6
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 4.3e-113 412.1 366 57.4
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.3e-112 410.6 357 56.6
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 1.6e-112 410.2 367 59.1
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.6e-112 410.2 364 58.0
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.1e-112 409.8 362 57.5
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 2.8e-112 409.5 364 59.9
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 4.8e-112 408.7 370 59.7
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 2.4e-111 406.4 334 59.3
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 3.1e-111 406.0 367 59.1
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 5.3e-111 405.2 347 60.8
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 2.6e-110 402.9 359 55.7
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 5.8e-110 401.7 344 60.5
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 5.8e-110 401.7 357 55.5
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 8.4e-109 397.9 355 56.1
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 5.4e-108 395.2 365 54.5
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 7.1e-108 394.8 328 61.6
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 4.6e-107 392.1 358 55.9
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 6.0e-107 391.7 354 56.2
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 1.0e-106 391.0 355 54.9
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.3e-106 390.6 363 56.2
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.7e-106 390.2 360 54.7
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 6.6e-106 388.3 360 53.9
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 8.7e-106 387.9 367 54.8
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 8.7e-106 387.9 332 59.6
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 8.7e-106 387.9 362 55.5
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.5e-105 387.1 355 55.8
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.5e-105 386.3 370 54.6
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 5.6e-105 385.2 360 53.9
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 2.1e-104 383.3 357 57.1
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.8e-104 382.9 354 55.4
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 3.4e-102 375.9 369 53.7
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.5e-102 375.6 352 54.8
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.7e-101 373.6 298 64.8
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 4.9e-101 372.1 335 56.7
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.1e-99 366.7 365 54.8
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.3e-98 364.0 374 53.2
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.8e-98 363.6 364 53.6
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 2.3e-98 363.2 380 52.6
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 8.7e-98 361.3 360 53.6
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 2.1e-96 356.7 323 57.3
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 2.4e-95 353.2 339 55.5
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.2e-94 350.9 357 53.2
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 2.6e-94 349.7 357 52.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 3.4e-94 349.4 365 54.0
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 5.8e-94 348.6 356 53.9
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.4e-92 344.0 302 60.3
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 4.2e-92 342.4 357 52.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.7e-91 339.7 357 52.4
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 6.7e-90 335.1 343 53.4
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 1.1e-89 334.3 365 52.6
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 5.7e-89 332.0 343 53.4
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 1.2e-86 324.3 332 56.0
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 8.4e-85 318.2 275 60.7
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 9.3e-84 314.7 258 61.2
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.1e-83 313.5 351 47.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 6.1e-83 312.0 346 50.3
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 5.7e-81 305.4 290 59.3
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 4.5e-78 295.8 275 57.5
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.0e-77 294.7 335 47.5
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.0e-77 292.4 356 46.9
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 1.1e-76 291.2 227 66.1
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.4e-76 290.8 255 56.1
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 1.9e-76 290.4 287 51.6
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 3.2e-76 289.7 269 58.4
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 4.2e-76 289.3 273 57.5
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 3.6e-75 286.2 274 54.0
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 5.5e-68 262.3 280 54.3
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.1e-65 254.6 234 66.7
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 6.3e-64 248.8 267 52.8
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.8e-61 239.6 334 41.6
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 2.0e-54 217.2 275 45.5
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.0e-54 217.2 187 60.4
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 3.5e-54 216.5 171 62.0
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 5.9e-54 215.7 271 48.7
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 1.9e-52 210.7 358 38.3
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 2.7e-46 190.3 371 34.5
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 3.5e-46 189.9 340 38.5
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 4.5e-46 189.5 343 36.2
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.0e-42 178.3 344 37.2
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.7e-37 161.0 224 45.5
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 2.5e-36 157.1 162 50.0
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.6e-35 154.5 218 46.3
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.5e-33 147.9 223 41.7
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 2.3e-26 124.0 93 60.2
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 3.1e-26 123.6 439 26.0
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.5e-25 121.3 84 61.9
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 3.7e-24 116.7 194 38.1
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 6.4e-24 115.9 128 46.9
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.5e-20 104.8 78 56.4
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.7e-19 99.8 91 47.3
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 3.4e-17 93.6 65 56.9
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.3e-16 91.7 206 31.6
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 8.3e-16 89.0 219 35.2
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-14 85.1 69 68.1
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.0e-13 80.5 66 57.6
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 3.3e-12 77.0 351 25.9
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 5.2e-10 69.7 213 31.9
FAN06G0223 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.7e-08 64.7 29 96.6
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 2.9e-08 63.9 58 56.9
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 4.9e-08 63.2 37 78.4
PRCOL_00006890 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 6.4e-08 62.8 290 24.8
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.6e-06 58.2 58 53.4


User provided reference genes

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