Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 5.6e-71 270.8 133 100.0
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 5.6e-71 270.8 133 100.0
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-69 264.6 133 98.5
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-69 264.6 133 98.5
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 7.6e-68 260.4 133 96.2
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.0e-67 260.0 133 97.0
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 3.1e-61 238.4 133 88.0
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 4.1e-61 238.0 133 87.2
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 1.3e-59 233.0 133 84.2
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 3.0e-56 221.9 133 79.7
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 3.0e-56 221.9 133 80.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 3.9e-56 221.5 133 79.7
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 8.8e-56 220.3 131 80.2
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 3.3e-55 218.4 133 78.2
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 7.4e-55 217.2 131 78.6
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 7.4e-55 217.2 133 78.9
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.3e-54 216.5 131 78.6
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.7e-54 216.1 133 78.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 3.7e-54 214.9 133 75.2
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 3.7e-54 214.9 133 76.7
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 6.3e-54 214.2 133 78.9
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.8e-53 212.6 133 77.4
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 1.8e-53 212.6 133 75.9
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 2.4e-53 212.2 133 77.4
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 76.7
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.1e-53 211.5 133 76.7
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 5.3e-53 211.1 133 75.9
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.9e-53 210.7 131 76.3
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 6.9e-53 210.7 133 75.2
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 9.1e-53 210.3 133 75.9
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 9.1e-53 210.3 133 74.4
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 4.5e-52 208.0 133 75.9
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 4.5e-52 208.0 133 73.7
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 4.5e-52 208.0 133 72.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 1.7e-51 206.1 133 73.7
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 2.2e-51 205.7 133 74.4
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.9e-51 205.3 129 76.7
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.9e-51 205.3 133 74.4
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 3.8e-51 204.9 133 72.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.8e-51 204.9 132 72.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 6.5e-51 204.1 131 75.6
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 70.7
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 8.5e-51 203.8 141 70.9
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.1e-50 203.4 132 73.5
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 74.0
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 2.5e-50 202.2 128 75.0
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 4.2e-50 201.4 132 72.0
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 7.2e-50 200.7 133 72.2
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 9.4e-50 200.3 131 75.6
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 1.2e-49 199.9 133 69.9
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 2.1e-49 199.1 131 71.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 2.1e-49 199.1 131 73.3
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 74.0
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 74.0
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 74.0
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 2.7e-49 198.7 131 74.0
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.7e-49 198.7 133 70.7
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 73.3
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 7.9e-49 197.2 133 70.7
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 72.5
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 72.5
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 71.8
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 71.0
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 2.3e-48 195.7 131 71.8
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 5.1e-48 194.5 131 70.2
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 5.1e-48 194.5 131 70.2
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 6.7e-48 194.1 131 71.0
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 69.5
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.6e-47 192.2 125 72.0
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 4.4e-47 191.4 140 68.6
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.7e-47 191.0 131 68.7
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 7.4e-47 190.7 141 68.8
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.3e-46 189.9 140 67.9
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 1.3e-46 189.9 140 68.6
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 1.7e-46 189.5 144 67.4
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 3.7e-46 188.3 136 68.4
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 4.8e-46 188.0 134 68.7
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 6.3e-46 187.6 138 67.4
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 6.3e-46 187.6 138 67.4
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 8.2e-46 187.2 131 65.6
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.2e-46 187.2 128 67.2
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.1e-45 186.8 131 66.4
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 2.4e-45 185.7 125 71.2
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 5.3e-45 184.5 130 64.6
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 7.0e-45 184.1 133 67.7
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 9.1e-45 183.7 133 66.2
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.2e-44 183.3 132 64.4
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.6e-44 182.2 125 67.2
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.6e-44 182.2 125 67.2
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 2.6e-44 182.2 126 66.7
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 3.5e-44 181.8 133 69.2
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 4.5e-44 181.4 123 67.5
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 4.5e-44 181.4 129 67.4
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 4.5e-44 181.4 132 62.9
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 5.9e-44 181.0 129 66.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 5.9e-44 181.0 133 64.7
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 1.0e-43 180.3 132 62.1
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 2.2e-43 179.1 127 66.9
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 2.2e-43 179.1 129 66.7
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 5.0e-43 177.9 133 66.2
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 6.5e-43 177.6 133 61.7
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 8.5e-43 177.2 158 55.7
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 3.2e-42 175.3 133 62.4
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 4.2e-42 174.9 172 52.9
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 5.5e-42 174.5 132 59.8
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 7.2e-42 174.1 125 64.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 9.4e-42 173.7 125 66.4
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 9.4e-42 173.7 129 63.6
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 2.7e-41 172.2 129 62.8
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 2.2e-38 162.5 133 60.9
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.1e-37 158.7 131 59.5
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 4.1e-37 158.3 104 75.0
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.3e-35 153.3 127 62.2
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 1.9e-34 149.4 130 53.8
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 2.3e-32 142.5 131 54.2
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.2e-31 140.2 129 54.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.2e-31 140.2 93 71.0
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.0e-31 139.4 129 54.3
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 2.8e-30 135.6 95 67.4
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 5.3e-29 131.3 135 51.1
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 2.7e-28 129.0 78 85.9
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.7e-25 118.2 71 81.7
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.0e-24 117.1 71 77.5
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.3e-24 115.9 72 76.4
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.0e-24 115.2 75 74.7
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.4e-23 112.1 75 73.3
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 9.8e-23 110.5 70 75.7
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 9.8e-23 110.5 62 83.9
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 9.8e-23 110.5 62 83.9
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 9.8e-23 110.5 62 82.3
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.2e-22 109.4 76 67.1
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.8e-22 109.0 71 74.6
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.8e-21 106.3 62 79.0
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 4.1e-21 105.1 72 68.1
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 7.0e-21 104.4 76 65.8
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 7.7e-20 100.9 77 62.3
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 7.7e-20 100.9 65 73.8
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.7e-19 99.8 130 40.0
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 7.5e-15 84.3 64 64.1
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 1.7e-14 83.2 77 55.8
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.4e-13 79.3 56 67.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 5.4e-13 78.2 74 47.3
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.5e-12 75.5 116 36.2
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.3e-11 72.8 53 62.3
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 1.2e-09 67.0 58 55.2
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 8.9e-08 60.8 112 30.4
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 4.4e-07 58.5 58 36.2
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 9.8e-07 57.4 76 34.2
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.9e-06 55.8 48 50.0


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