Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2392 Fragaria x ananassa HOM05D001206 ORTHO05D016673 6.5e-38 160.2 80 100.0
FAN11G2548 Fragaria x ananassa HOM05D001206 ORTHO05D016673 5.1e-27 124.0 73 90.4
FAN26G0979 Fragaria x ananassa HOM05D001206 ORTHO05D016673 5.1e-27 124.0 73 90.4
FvH4_6g37630 Fragaria vesca HOM05D001206 ORTHO05D005935 1.2e-15 86.3 46 95.7
FAN02G0831 Fragaria x ananassa HOM05D001206 ORTHO05D005935 1.2e-15 86.3 46 95.7
FAN14G2675 Fragaria x ananassa HOM05D001206 ORTHO05D005935 1.2e-15 86.3 46 95.7
RcHm_v2.0_Chr2g0150631 Rosa chinensis HOM05D001206 ORTHO05D005935 1.2e-15 86.3 46 95.7
MD09G1156700 Malus domestica HOM05D001206 ORTHO05D005935 5.0e-14 80.9 46 89.1
MD17G1143200 Malus domestica HOM05D001206 ORTHO05D005935 5.0e-14 80.9 46 89.1
THA.LOC104824040 Tarenaya hassleriana HOM05D001206 ORTHO05D005935 5.0e-14 80.9 46 89.1
Migut.H02113 Erythranthe guttata HOM05D001206 ORTHO05D005935 1.1e-13 79.7 46 87.0
Eucgr.K01190 Eucalyptus grandis HOM05D001206 ORTHO05D005935 1.1e-13 79.7 46 87.0
Haze_13462 Corylus avellana HOM05D001206 ORTHO05D005935 1.5e-13 79.3 46 87.0
GSVIVG01020788001 Vitis vinifera HOM05D001206 ORTHO05D005935 1.5e-13 79.3 46 87.0
arahy.Tifrunner.gnm1.ann1.BZT8G9 Arachis hypogaea HOM05D001206 ORTHO05D005935 1.9e-13 79.0 46 87.0
arahy.Tifrunner.gnm1.ann1.DXFN4R Arachis hypogaea HOM05D001206 ORTHO05D005935 1.9e-13 79.0 46 87.0
MSTRG.12835 Avicennia marina HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 84.8
BcaB07g30635 Brassica carinata HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
A09p24920 Brassica napus HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
BraA09t38080Z Brassica rapa HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
Carub.0005s0348 Capsella rubella HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
Thhalv10012940m.g Eutrema salsugineum HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
Sp2g14920 Schrenkiella parvula HOM05D001206 ORTHO05D005935 2.5e-13 78.6 46 87.0
Lalb_Chr15g0080441 Lupinus albus HOM05D001206 ORTHO05D005935 3.2e-13 78.2 46 84.8
Manes.01G129100 Manihot esculenta HOM05D001206 ORTHO05D005935 3.2e-13 78.2 46 84.8
SalBow7G4591 Salvia bowleyana HOM05D001206 ORTHO05D005935 3.2e-13 78.2 46 84.8
TWI38G0487 Tripterygium wilfordii HOM05D001206 ORTHO05D005935 3.2e-13 78.2 46 87.0
Actinidia12826 Actinidia chinensis HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
CSS0014076 Camellia sinensis var. sinensis HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
CSS0050390 Camellia sinensis var. sinensis HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Dinv06275 Davidia involucrata HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Oeu032122.1 Olea europaea HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Rhsim06G0124000 Rhododendron simsii HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Sed0006625 Sechium edule HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Solyc10g007840.3 Solanum lycopersicum HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Sopen10g003740 Solanum pennellii HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
PGSC0003DMG401021239 Solanum tuberosum HOM05D001206 ORTHO05D005935 4.2e-13 77.8 46 84.8
Aqoxy3G00674 Aquilegia oxysepala HOM05D001206 ORTHO05D005935 5.5e-13 77.4 46 84.8
CANSAT64G1074 Cannabis sativa HOM05D001206 ORTHO05D005935 5.5e-13 77.4 46 84.8
PGR142G3322 Punica granatum HOM05D001206 ORTHO05D005935 5.5e-13 77.4 46 84.8
Zm00001eb068770 Zea mays HOM05D001206 ORTHO05D005935 5.5e-13 77.4 46 84.8
AT3G25660 Arabidopsis thaliana HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
CARHR288520 Cardamine hirsuta HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Ca_14632_v3 Cicer arietinum L. HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Gohir.A06G169500 Gossypium hirsutum HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Gohir.D06G177200 Gossypium hirsutum HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Gorai.N008100 Gossypium raimondii HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Lj6g0018418 Lotus japonicus HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Medtr3g048950 Medicago truncatula HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Psat5g186880 Pisum sativum HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Potri.018G086350 Populus trichocarpa HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Prupe.3G169900 Prunus persica HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
QL08p043357 Quercus lobata HOM05D001206 ORTHO05D005935 7.2e-13 77.0 46 84.8
Sabra18G0074600 Salix brachista HOM05D003301 ORTHO05D003665 7.2e-13 77.0 46 84.8
C09p31950 Brassica napus HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
BolC9t56049H Brassica oleracea HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
CAN.G1191.9 Capsicum annuum HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
CiPaw.03G196100 Carya illinoinensis HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
Glyma.08G311400 Glycine max HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
Thecc.10G113900 Theobroma cacao HOM05D001206 ORTHO05D005935 9.4e-13 76.6 46 84.8
BcaC04g21423 Brassica carinata HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 82.6
CARHR260190 Cardamine hirsuta HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 84.8
ClCG09G022260 Citrullus lanatus HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 82.6
Glyma.18G104200 Glycine max HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 84.8
Hma1.2p1_0178F.1_g078230 Hydrangea macrophylla HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 82.6
Hma1.2p1_3358F.1_g335550 Hydrangea macrophylla HOM05D001206 ORTHO05D005935 1.2e-12 76.3 46 82.6
Ah.01g016080 Amaranthus hybridus HOM05D001206 ORTHO05D005935 1.6e-12 75.9 46 84.8
EL10Ac9g21024 Beta vulgaris HOM05D001206 ORTHO05D005935 1.6e-12 75.9 46 84.8
AUR62032754 Chenopodium quinoa HOM05D001206 ORTHO05D005935 1.6e-12 75.9 46 84.8
Hund07738 Selenicereus undatus HOM05D001206 ORTHO05D005935 1.6e-12 75.9 46 84.8
AL5G14200 Arabidopsis lyrata HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Cpa.g.sc139.29 Carica papaya HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Ciclev10014821m.g Citrus clementina HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Nn6g34432 Nelumbo nucifera HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Peaxi162Scf00035g03126 Petunia axillaris HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Phvul.006G036200 Phaseolus vulgaris HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
Sc21g0004390 Simmondsia chinensis HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 82.6
SGA_v2.0_scaffold4G02113 Striga asiatica HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 80.4
TAR629G1684 Trochodendron aralioides HOM05D001206 ORTHO05D005935 2.1e-12 75.5 46 80.4
ECA233G3159 Erigeron canadensis HOM05D001206 ORTHO05D005935 2.7e-12 75.1 46 84.8
MBI05_g35447_MAGBIO Magnolia biondii HOM05D001206 ORTHO05D005935 2.7e-12 75.1 46 82.6
Aa31LG2G6650 Aethionema arabicum HOM05D001206 ORTHO05D005935 3.6e-12 74.7 46 80.4
arahy.Tifrunner.gnm1.ann1.3FS28A Arachis hypogaea HOM05D001206 ORTHO05D016673 3.6e-12 74.7 46 82.6
Os04g0643200 Oryza sativa ssp. japonica HOM05D001206 ORTHO05D005935 3.6e-12 74.7 46 80.4
AUR62004905 Chenopodium quinoa HOM05D001206 ORTHO05D005935 4.7e-12 74.3 46 82.6
MELO3C014457.2 Cucumis melo HOM05D001206 ORTHO05D005935 6.1e-12 73.9 46 80.4
CsaV3_6G037950 Cucumis sativus L. HOM05D004204 ORTHO05D005935 6.1e-12 73.9 46 80.4
Mapoly0029s0077 Marchantia polymorpha HOM05D001206 ORTHO05D005935 6.1e-12 73.9 46 80.4
PSO017G2524 Papaver somniferum HOM05D001206 ORTHO05D005935 6.1e-12 73.9 46 78.3
SEGI_06909 Sequoiadendron giganteum HOM05D001206 ORTHO05D005935 8.0e-12 73.6 46 76.1
THA.LOC104805240 Tarenaya hassleriana HOM05D001206 ORTHO05D005935 8.0e-12 73.6 46 80.4
Atru.chr6.3565 Acer truncatum HOM05D001206 ORTHO05D005935 1.0e-11 73.2 46 80.4
DCAR_013291 Daucus carota HOM05D001206 ORTHO05D005935 1.4e-11 72.8 46 78.3
HanXRQChr13g0387351 Helianthus annuus HOM05D001206 ORTHO05D005935 2.3e-11 72.0 46 80.4
Lsat_1_v5_gn_8_31840 Lactuca sativa HOM05D001206 ORTHO05D005935 2.3e-11 72.0 46 80.4
PSO478G1473 Papaver somniferum HOM05D001206 ORTHO05D005935 3.0e-11 71.6 46 76.1
ATR1096G083 Amborella trichopoda HOM05D001206 ORTHO05D005935 5.2e-11 70.9 46 73.9
AagrBONN_evm.TU.Sc2ySwM_368.1898 Anthoceros agrestis HOM05D001206 ORTHO05D005935 8.8e-11 70.1 46 76.1
CDE05G3011 Ceratophyllum demersum HOM05D001206 ORTHO05D005935 4.4e-10 67.8 46 73.9
Pp3c27_1950 Physcomitrium patens HOM05D001206 ORTHO05D005935 4.4e-10 67.8 46 73.9
PRCOL_00000262 Prasinoderma coloniale HOM05D001206 ORTHO05D005935 7.5e-10 67.0 46 69.6
Pp3c16_16670 Physcomitrium patens HOM05D001206 ORTHO05D005935 9.7e-10 66.6 46 71.7
Cc05_g09120 Coffea canephora HOM05D001206 ORTHO05D005935 2.8e-09 65.1 46 69.6
SMO118G0181 Selaginella moellendorffii HOM05D001206 ORTHO05D005935 2.8e-09 65.1 46 69.6
arahy.Tifrunner.gnm1.ann1.43H8SX Arachis hypogaea HOM05D000371 ORTHO05D013217 4.8e-09 64.3 60 61.7
arahy.Tifrunner.gnm1.ann1.LJ4ZNG Arachis hypogaea HOM05D000371 ORTHO05D013217 4.8e-09 64.3 46 76.1
MCO01G356 Micromonas commoda HOM05D001206 ORTHO05D005935 4.8e-09 64.3 46 67.4
CBR_g12438 Chara braunii HOM05D001206 ORTHO05D005935 6.3e-09 63.9 46 69.6
Cre10.g439400 Chlamydomonas reinhardtii HOM05D001206 ORTHO05D005935 1.1e-08 63.2 46 67.4
Nitab4.5_0001402g0110 Nicotiana tabacum HOM05D001206 ORTHO05D005935 1.1e-08 63.2 37 83.8
Nitab4.5_0002027g0090 Nicotiana tabacum HOM05D001206 ORTHO05D005935 4.1e-08 61.2 35 88.6
BraA02t08421Z Brassica rapa HOM05D001206 ORTHO05D016673 7.0e-08 60.5 45 73.3
TPR.G13547 Trifolium pratense HOM05D001206 ORTHO05D005935 9.1e-08 60.1 35 85.7
TPR.G14752 Trifolium pratense HOM05D001206 ORTHO05D005935 9.1e-08 60.1 35 85.7
vmacro12422 Vaccinium macrocarpon HOM05D001206 ORTHO05D005935 9.1e-08 60.1 81 48.1
vmacro12423 Vaccinium macrocarpon HOM05D001206 ORTHO05D005935 9.1e-08 60.1 81 48.1
VMungo0540G0597 Vigna mungo HOM05D001206 ORTHO05D005935 1.2e-07 59.7 35 85.7
A02p33990 Brassica napus HOM05D001206 ORTHO05D016673 5.0e-06 54.3 47 61.7


User provided reference genes

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