Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.5e-245 850.9 449 100.0
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.9e-232 808.9 456 95.6
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.7e-218 761.9 451 90.9
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.4e-182 643.3 454 78.9
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 9.5e-179 630.6 453 77.7
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 1.9e-171 606.3 369 89.4
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 2.3e-169 599.4 458 73.6
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 3.7e-167 592.0 459 72.1
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 8.3e-167 590.9 477 70.4
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.0e-164 583.9 452 71.2
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.1e-163 580.5 453 70.9
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 9.5e-163 577.4 454 70.7
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.3e-161 572.8 453 69.8
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 8.9e-161 570.9 450 70.4
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 8.9e-161 570.9 457 69.4
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 4.4e-160 568.5 452 68.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 5.8e-160 568.2 451 70.3
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 7.5e-160 567.8 453 70.0
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 2.9e-159 565.8 451 69.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 3.7e-159 565.5 457 68.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 6.4e-159 564.7 452 67.9
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 1.4e-158 563.5 453 68.2
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 5.4e-158 561.6 452 69.2
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 5.4e-158 561.6 452 69.5
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 9.2e-158 560.8 452 68.4
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 3.0e-156 555.8 463 67.8
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 1.2e-154 550.4 452 68.1
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 3.6e-154 548.9 449 66.8
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 6.2e-154 548.1 452 67.5
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.8e-153 546.6 449 66.6
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 5.2e-153 545.0 452 67.0
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 6.8e-153 544.7 451 68.1
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 8.9e-153 544.3 452 65.7
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 8.9e-153 544.3 453 67.3
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 2.6e-152 542.7 452 67.7
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 9.9e-152 540.8 452 66.6
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 9.9e-152 540.8 452 67.5
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 1.7e-151 540.0 452 66.4
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 8.4e-151 537.7 452 67.3
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.9e-150 536.6 455 65.9
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.9e-150 536.6 449 65.7
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 3.2e-150 535.8 452 67.3
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 9.2e-150 534.3 452 66.2
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 1.6e-149 533.5 452 66.6
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 4.6e-149 531.9 453 64.7
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 4.6e-149 531.9 452 65.9
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 1.3e-148 530.4 449 66.4
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 3.9e-148 528.9 470 64.3
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 9.6e-147 524.2 448 66.5
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 9.6e-147 524.2 464 64.9
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.6e-146 523.5 429 69.7
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 4.7e-146 521.9 446 63.2
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 6.2e-146 521.5 449 65.3
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 4.0e-145 518.8 449 65.0
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 1.5e-144 516.9 445 63.6
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 2.6e-144 516.2 449 65.3
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 9.9e-144 514.2 491 60.1
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 8.4e-143 511.1 450 64.7
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.1e-142 510.8 455 61.5
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 1.9e-142 510.0 381 76.6
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.6e-141 506.9 452 64.4
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 7.8e-141 504.6 448 62.5
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 7.8e-141 504.6 453 61.8
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 1.7e-140 503.4 448 62.5
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 1.7e-140 503.4 454 61.0
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 1.7e-140 503.4 453 64.2
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 3.9e-140 502.3 448 62.3
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 8.7e-140 501.1 455 61.5
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 8.7e-140 501.1 450 63.3
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 4.3e-139 498.8 453 61.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 7.3e-139 498.0 424 66.7
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 1.4e-137 493.8 448 62.9
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 5.3e-137 491.9 456 60.3
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 1.2e-133 480.7 447 60.4
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 4.6e-133 478.8 445 60.7
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 1.8e-132 476.9 448 61.2
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.8e-130 469.5 449 60.4
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.4e-128 462.6 446 60.8
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 4.5e-128 462.2 454 59.0
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 9.9e-128 461.1 446 59.2
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 4.6e-125 452.2 470 58.3
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 6.2e-122 441.8 408 65.9
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 8.2e-122 441.4 470 56.2
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.2e-120 437.6 272 87.5
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 3.4e-120 436.0 464 55.8
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 4.3e-115 419.1 452 55.5
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 2.5e-107 393.3 423 57.2
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 4.7e-101 372.5 285 67.4
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 1.0e-100 371.3 305 64.3
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.0e-100 369.8 341 62.2
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.8e-84 317.4 455 45.1
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.7e-79 300.8 454 46.9
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 3.4e-75 286.6 269 59.9
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 2.8e-74 283.5 265 65.7
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 8.0e-69 265.4 296 52.0
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 1.4e-68 264.6 224 64.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 5.0e-55 219.5 166 70.5
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.0e-47 195.3 175 61.7
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 7.3e-46 189.1 103 98.1
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 8.9e-44 182.2 150 60.0
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 4.9e-42 176.4 139 69.1
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 6.6e-39 166.0 89 96.6
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.6e-37 161.4 164 55.5
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 3.2e-33 147.1 93 87.1
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-32 144.8 93 86.0
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.1e-32 144.4 77 97.4
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 2.7e-32 144.1 145 57.2
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 3.9e-31 140.2 90 76.7
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-30 137.5 93 82.8
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.4e-27 127.1 134 57.5
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.3e-26 125.2 484 27.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 3.2e-25 120.6 92 68.5
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 5.1e-23 113.2 74 83.8
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 6.2e-21 106.3 96 60.4
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 1.8e-20 104.8 73 74.0
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 3.4e-19 100.5 107 49.5
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.6e-16 91.7 65 75.4
FAN05G0645 Fragaria x ananassa HOM05D001482 ORTHO05D017727 2.7e-08 64.3 43 79.1


User provided reference genes

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