Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.1e-41 172.9 90 100.0
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 4.1e-41 171.0 90 98.9
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.9e-39 164.5 86 98.8
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 3.9e-39 164.5 88 95.5
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 6.6e-39 163.7 86 97.7
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.5e-38 162.5 89 91.0
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.9e-38 162.2 89 91.0
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 4.3e-38 161.0 89 91.0
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 9.5e-38 159.8 89 89.9
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.2e-37 159.5 89 89.9
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.6e-37 159.1 89 88.8
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.1e-37 158.7 89 87.6
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 3.6e-37 157.9 89 89.9
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 4.7e-37 157.5 89 89.9
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 8.0e-37 156.8 88 90.9
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 8.0e-37 156.8 88 90.9
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 8.0e-37 156.8 90 86.7
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.1e-36 156.4 89 87.6
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.1e-36 156.4 89 89.9
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 3.1e-36 154.8 89 88.8
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 3.1e-36 154.8 87 88.5
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 4.0e-36 154.5 89 88.8
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 4.0e-36 154.5 89 86.5
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.2e-36 154.1 89 86.5
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 6.8e-36 153.7 89 86.5
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 6.8e-36 153.7 90 84.4
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.2e-35 152.9 88 86.4
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 2.0e-35 152.1 89 83.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 2.0e-35 152.1 89 83.1
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 4.4e-35 151.0 89 86.5
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 5.8e-35 150.6 89 83.1
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 5.8e-35 150.6 88 85.2
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 5.8e-35 150.6 88 85.2
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 9.8e-35 149.8 87 85.1
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.3e-34 149.4 89 84.3
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.3e-34 149.4 89 84.3
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 1.3e-34 149.4 89 84.3
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.2e-34 148.7 89 79.8
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.7e-34 147.9 87 85.1
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 3.7e-34 147.9 89 84.3
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 4.9e-34 147.5 89 83.1
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 6.4e-34 147.1 89 80.9
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 8.3e-34 146.7 89 82.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.1e-33 146.4 89 80.9
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 1.1e-33 146.4 86 81.4
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.4e-33 146.0 89 83.1
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.4e-33 146.0 88 80.7
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.9e-33 145.6 89 84.3
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 3.2e-33 144.8 83 86.7
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.2e-33 144.8 88 83.0
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 5.4e-33 144.1 89 83.1
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 5.4e-33 144.1 86 80.2
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 7.0e-33 143.7 89 83.1
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 9.2e-33 143.3 87 79.3
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 9.2e-33 143.3 84 83.3
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.6e-32 142.5 89 78.7
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-32 142.1 80 91.2
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 6.0e-32 140.6 84 79.8
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.0e-31 139.8 87 80.5
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 1.7e-31 139.0 83 81.9
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 3.0e-31 138.3 83 81.9
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 3.0e-31 138.3 83 81.9
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 6.6e-31 137.1 87 79.3
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 6.6e-31 137.1 87 79.3
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 4.3e-30 134.4 84 82.1
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 7.3e-30 133.7 88 76.1
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 9.5e-30 133.3 80 82.5
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 9.5e-30 133.3 84 76.2
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.8e-29 131.7 87 73.6
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.6e-29 131.3 84 75.0
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 4.7e-29 131.0 85 75.3
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 1.1e-28 129.8 90 73.3
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.1e-28 129.8 88 72.7
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.4e-28 129.4 81 80.2
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 1.8e-28 129.0 71 90.1
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.8e-28 129.0 84 72.6
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 3.1e-28 128.3 88 71.6
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 3.1e-28 128.3 83 75.9
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 4.0e-28 127.9 80 80.0
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 5.2e-28 127.5 83 75.9
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 5.2e-28 127.5 81 77.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 1.2e-27 126.3 81 77.8
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.5e-27 125.9 81 79.0
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.6e-27 125.2 83 74.7
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 3.4e-27 124.8 89 71.9
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 4.9e-26 120.9 90 72.2
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 6.4e-26 120.6 83 71.1
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 8.3e-26 120.2 86 69.8
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.4e-25 119.4 83 69.9
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 3.2e-25 118.2 86 67.4
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 5.4e-25 117.5 69 82.6
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.2e-24 116.3 83 67.5
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 4.6e-24 114.4 85 65.9
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 4.6e-24 114.4 85 65.9
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.3e-23 112.8 85 64.7
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 6.6e-23 110.5 88 68.2
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.5e-22 109.4 85 62.4
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 2.5e-22 108.6 85 62.4
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 4.3e-22 107.8 85 60.0
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 4.3e-22 107.8 85 60.0
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 4.3e-22 107.8 85 60.0
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 4.3e-22 107.8 85 60.0
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 5.6e-22 107.5 85 60.0
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 5.6e-22 107.5 65 81.5
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 1.6e-21 105.9 85 58.8
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.6e-21 105.9 79 67.1
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 2.8e-21 105.1 85 60.0
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 2.8e-21 105.1 85 60.0
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.1e-20 103.2 83 61.4
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.4e-20 102.8 58 86.2
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 5.2e-20 100.9 85 58.8
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 7.8e-16 87.0 49 83.7
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 1.7e-15 85.9 85 52.9
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.3e-15 85.5 68 61.8
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.3e-15 85.5 50 88.0
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 2.5e-14 82.0 85 52.9
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 2.5e-14 82.0 49 81.6
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 3.3e-14 81.6 58 70.7
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 9.6e-14 80.1 58 67.2
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 9.6e-14 80.1 58 70.7
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 2.8e-13 78.6 58 65.5
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.4e-12 76.3 67 61.2
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-09 66.6 46 67.4
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-09 66.6 46 67.4


User provided reference genes

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