Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 3.4e-92 341.7 171 100.0
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.7e-91 339.3 171 99.4
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 4.8e-91 337.8 171 98.8
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.8e-91 337.8 171 98.8
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.4e-90 336.3 169 98.8
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.4e-90 336.3 169 98.8
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.4e-90 336.3 171 98.2
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.1e-90 334.7 171 97.7
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 2.2e-88 328.9 171 95.9
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 6.8e-85 317.4 169 91.7
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 1.8e-82 309.3 169 88.2
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 7.0e-82 307.4 169 88.8
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 1.4e-77 293.1 169 85.2
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 2.3e-77 292.4 173 86.7
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 2.0e-76 289.3 170 83.5
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 1.3e-75 286.6 155 89.0
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 2.2e-75 285.8 163 85.3
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 1.1e-74 283.5 155 88.4
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 1.4e-74 283.1 165 84.8
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.4e-74 283.1 169 83.4
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.4e-74 283.1 163 84.0
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 1.8e-74 282.7 169 81.7
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 1.8e-74 282.7 169 81.7
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 1.8e-74 282.7 169 84.0
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 2.4e-74 282.3 169 81.7
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 2.4e-74 282.3 169 82.2
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.4e-74 282.3 162 85.2
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 3.2e-74 282.0 169 82.2
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 4.1e-74 281.6 169 81.1
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 4.1e-74 281.6 169 81.1
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 4.1e-74 281.6 169 82.8
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 5.4e-74 281.2 169 81.7
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 5.4e-74 281.2 163 83.4
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 5.4e-74 281.2 155 87.1
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.4e-74 281.2 161 84.5
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 7.0e-74 280.8 169 81.7
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 7.0e-74 280.8 163 84.0
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 9.2e-74 280.4 162 84.6
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 9.2e-74 280.4 169 81.1
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.2e-73 280.0 169 82.2
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 1.6e-73 279.6 165 81.8
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 2.0e-73 279.3 163 83.4
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 2.0e-73 279.3 163 83.4
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 2.0e-73 279.3 170 80.0
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 2.0e-73 279.3 169 81.1
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 2.7e-73 278.9 160 84.4
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 4.5e-73 278.1 169 81.1
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 4.5e-73 278.1 158 85.4
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 5.9e-73 277.7 163 82.8
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 5.9e-73 277.7 160 83.8
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 5.9e-73 277.7 155 83.9
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 5.9e-73 277.7 155 83.9
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 5.9e-73 277.7 169 81.7
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 1.0e-72 276.9 164 82.9
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.3e-72 276.6 165 84.2
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.7e-72 276.2 152 86.8
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 1.7e-72 276.2 169 80.5
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 3.9e-72 275.0 151 86.8
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 8.6e-72 273.9 152 84.9
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 8.6e-72 273.9 169 81.7
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 1.5e-71 273.1 151 85.4
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 1.9e-71 272.7 151 85.4
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 2.5e-71 272.3 151 84.8
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 2.5e-71 272.3 169 79.3
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 3.3e-71 271.9 151 85.4
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 4.3e-71 271.6 171 77.8
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 4.3e-71 271.6 169 80.5
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 5.6e-71 271.2 169 79.3
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 5.6e-71 271.2 169 78.1
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 9.5e-71 270.4 178 75.3
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.2e-70 270.0 169 78.7
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.2e-70 270.0 169 78.7
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 3.6e-70 268.5 151 84.1
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 4.7e-70 268.1 176 76.1
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 6.1e-70 267.7 152 83.6
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 6.1e-70 267.7 148 87.2
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 6.1e-70 267.7 160 81.2
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 8.0e-70 267.3 153 83.0
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.0e-69 266.9 169 78.1
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 1.0e-69 266.9 163 80.4
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 1.4e-69 266.5 177 75.7
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 1.4e-69 266.5 168 81.0
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 2.3e-69 265.8 169 78.1
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 2.3e-69 265.8 151 82.1
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 2.3e-69 265.8 171 78.4
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 3.1e-69 265.4 166 77.7
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 5.2e-69 264.6 170 76.5
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 5.2e-69 264.6 153 84.3
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 6.8e-69 264.2 171 77.8
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 8.9e-69 263.8 171 78.4
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 8.9e-69 263.8 171 78.4
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 1.2e-68 263.5 165 78.8
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 1.5e-68 263.1 171 78.4
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 1.5e-68 263.1 168 78.0
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 2.0e-68 262.7 177 74.0
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 2.6e-68 262.3 163 79.1
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.6e-68 262.3 168 78.0
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 3.4e-68 261.9 176 77.3
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 4.4e-68 261.5 174 75.9
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 4.4e-68 261.5 169 76.3
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 5.8e-68 261.2 168 77.4
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 5.8e-68 261.2 168 77.4
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 5.8e-68 261.2 169 74.6
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 9.8e-68 260.4 165 78.2
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 1.7e-67 259.6 174 75.9
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 2.2e-67 259.2 174 76.4
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 2.2e-67 259.2 171 77.2
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 2.2e-67 259.2 174 73.6
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 2.9e-67 258.8 171 77.2
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 6.4e-67 257.7 174 75.9
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 8.3e-67 257.3 153 79.1
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 1.1e-66 256.9 174 75.9
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 4.1e-66 255.0 153 81.7
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 7.0e-66 254.2 176 72.7
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 7.0e-66 254.2 176 72.7
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 7.0e-66 254.2 160 78.1
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 7.0e-66 254.2 157 78.3
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.6e-65 253.1 163 76.1
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 2.0e-65 252.7 175 73.7
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 7.8e-65 250.8 170 72.9
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 7.8e-65 250.8 175 73.1
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 1.0e-64 250.4 151 78.8
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 1.3e-64 250.0 175 73.1
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 1.7e-64 249.6 158 75.3
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.3e-64 249.2 172 72.7
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 2.3e-64 249.2 172 72.7
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 2.3e-64 249.2 149 79.2
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 5.0e-64 248.1 158 75.3
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 2.5e-63 245.7 158 73.4
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 5.6e-63 244.6 173 74.0
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 7.3e-63 244.2 158 74.1
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.2e-62 243.4 228 58.8
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 6.2e-62 241.1 164 72.6
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 5.2e-61 238.0 164 70.7
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 1.5e-60 236.5 148 75.0
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 2.6e-60 235.7 148 74.3
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 2.9e-59 232.3 148 73.6
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 9.2e-58 227.3 132 81.8
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 1.0e-56 223.8 152 72.4
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 2.3e-56 222.6 128 82.8
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 2.5e-55 219.2 130 81.5
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 9.5e-55 217.2 163 68.1
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 4.0e-53 211.8 165 61.8
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 1.5e-52 209.9 132 77.3
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 2.3e-48 196.1 112 80.4
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 4.9e-43 178.3 154 61.0
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 1.9e-42 176.4 133 61.7
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 1.9e-42 176.4 134 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 4.6e-41 171.8 134 61.9
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 3.9e-40 168.7 134 60.4
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.9e-39 166.4 141 57.4
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 1.3e-38 163.7 108 79.6
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.3e-37 158.3 152 59.2
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 2.0e-36 156.4 86 95.3
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 9.3e-34 147.5 91 78.0
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.2e-33 147.1 88 85.2
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 1.6e-30 136.7 120 53.3
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 5.8e-28 128.3 98 68.4
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.7e-27 126.7 103 61.2
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.2e-27 126.3 105 66.7
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 7.1e-26 121.3 131 43.5
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 9.3e-26 120.9 179 39.7
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.3e-23 112.1 136 41.9
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.3e-23 112.1 136 41.9
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 5.6e-23 111.7 71 76.1
AT4G28005 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 9.6e-23 110.9 169 43.2
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 1.1e-21 107.5 56 82.1
BcaC03g14494 Brassica carinata HOM05D004003 ORTHO05D004595 3.4e-20 102.4 66 69.7
COL.COLO4_06858 Corchorus olitorius HOM05D004003 ORTHO05D004595 1.1e-18 97.4 57 75.4
CAN.G640.19 Capsicum annuum HOM05D004003 ORTHO05D004595 6.7e-16 88.2 67 59.7
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 1.5e-15 87.0 100 42.0
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 1.5e-15 87.0 100 42.0
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 4.8e-14 82.0 95 38.9
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.1e-13 80.9 55 70.9
ATR0721G175 Amborella trichopoda HOM05D004003 ORTHO05D004595 5.8e-12 75.1 54 57.4
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 8.4e-11 71.2 95 43.2


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