Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2125 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.7e-141 503.8 258 100.0
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.3e-76 290.4 171 87.7
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.9e-76 288.9 171 87.1
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.4e-49 200.7 111 97.3
FAN01G0602 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.9e-47 193.0 147 71.4
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 6.5e-47 191.8 190 57.4
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 8.7e-44 181.4 187 56.7
FvH4_6g44041 Fragaria vesca HOM05D008847 ORTHO05D000368 2.5e-43 179.9 188 56.9
FAN01G0028 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.6e-37 159.5 87 96.6
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-30 137.1 278 38.5
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-24 117.5 184 44.6
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.5e-19 100.9 161 43.5
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.5e-19 100.9 178 41.6
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.5e-19 100.9 161 42.9
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 2.0e-19 100.5 166 40.4
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.0e-19 100.5 165 41.8
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 2.6e-19 100.1 170 44.7
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.5e-19 98.6 184 42.4
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 3.7e-18 96.3 161 43.5
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.8e-18 95.9 171 40.4
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-18 95.5 168 41.7
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 6.3e-18 95.5 154 41.6
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 1.8e-17 94.0 171 40.9
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.1e-17 92.8 173 40.5
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.0e-17 92.0 155 40.6
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.0e-16 90.5 164 39.0
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.7e-16 90.1 172 40.7
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 3.5e-16 89.7 169 38.5
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 4.5e-16 89.4 164 39.0
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.7e-16 88.6 161 37.9
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-15 87.8 144 41.0
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.9e-15 86.7 161 36.6
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.9e-15 86.7 169 37.9
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.8e-15 86.3 144 41.0
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.8e-15 86.3 145 41.4
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 3.8e-15 86.3 182 36.8
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.0e-15 85.9 144 41.0
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 5.0e-15 85.9 186 37.1
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.6e-13 79.7 119 42.0
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 6.1e-13 79.0 161 39.8
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 1.8e-12 77.4 159 33.3
FvH4_6g50840 Fragaria vesca HOM05D000576 ORTHO05D000368 2.3e-12 77.0 132 40.2
MD09G1063900 Malus domestica HOM05D000576 ORTHO05D000368 1.5e-11 74.3 148 37.8
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.4e-11 73.2 172 33.7
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.7e-10 70.9 146 36.3
FAN21G2612 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.8e-10 70.1 41 80.5
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.1e-09 68.2 103 43.7
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 4.1e-09 66.2 161 32.9
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.4e-09 65.9 171 35.1
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 5.4e-09 65.9 152 34.2
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.0e-09 65.5 151 34.4
RcHm_v2.0_Chr3g0476181 Rosa chinensis HOM05D000576 ORTHO05D000368 1.2e-08 64.7 111 44.1
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-08 64.7 150 34.7
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-08 63.9 101 43.6
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-08 63.5 95 41.1
COL.COLO4_13869 Corchorus olitorius HOM05D010825 ORTHO05D012667 3.5e-08 63.2 153 30.7
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.5e-08 63.2 98 42.9
Prupe.7G249000 Prunus persica HOM05D000576 ORTHO05D000368 4.5e-08 62.8 153 36.6
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 5.9e-08 62.4 171 33.3
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 5.9e-08 62.4 159 32.1
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-07 61.6 147 29.3
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.2e-07 60.5 231 28.1
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.2e-07 60.5 177 33.3
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.0e-07 59.3 189 27.5
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.0e-07 59.3 158 36.7
Medtr2g032920 Medicago truncatula HOM05D008175 ORTHO05D010403 6.5e-07 58.9 80 42.5
MD15G1165800 Malus domestica HOM05D000576 ORTHO05D000368 8.5e-07 58.5 153 35.3
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 8.5e-07 58.5 157 30.6
Dinv18997 Davidia involucrata HOM05D001396 ORTHO05D000493 1.9e-06 57.4 194 32.0
FAN14G4050 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.5e-06 55.8 78 47.4
AUR62014732 Chenopodium quinoa HOM05D000576 ORTHO05D008290 7.2e-06 55.5 156 30.1
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 7.2e-06 55.5 162 31.5
TPR.G4066 Trifolium pratense HOM05D008175 ORTHO05D010403 9.4e-06 55.1 153 29.4


User provided reference genes

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