Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.6e-144 515.4 266 100.0
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.5e-139 499.6 258 99.6
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 9.7e-131 470.3 256 94.9
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.4e-129 466.5 244 98.0
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.6e-128 462.2 243 97.5
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.2e-115 420.2 247 87.9
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 2.7e-96 355.9 243 77.0
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 4.6e-96 355.1 236 76.3
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.5e-88 328.9 229 72.5
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 8.9e-84 314.3 248 66.5
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 9.2e-81 304.3 216 72.7
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 9.2e-81 304.3 195 77.9
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 2.7e-80 302.8 215 69.3
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 3.5e-80 302.4 193 76.7
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.3e-79 300.4 215 73.5
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.0e-79 299.3 195 76.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 5.1e-79 298.5 190 76.8
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 8.6e-79 297.7 231 67.5
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.5e-78 297.0 191 78.5
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.9e-78 296.6 241 63.1
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.3e-78 295.4 216 69.0
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 2.8e-77 292.7 207 72.0
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 4.7e-77 292.0 219 66.2
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.1e-76 290.8 192 74.0
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 3.1e-76 289.3 189 74.1
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 8.9e-76 287.7 189 71.4
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 8.9e-76 287.7 219 68.5
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.2e-75 287.3 232 62.9
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.5e-75 287.0 187 75.4
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 3.4e-75 285.8 192 73.4
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 7.6e-75 284.6 176 80.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 7.6e-75 284.6 206 69.9
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 3.8e-74 282.3 203 71.4
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 8.4e-74 281.2 213 67.1
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 8.4e-74 281.2 241 61.4
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.4e-73 280.4 223 67.7
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.9e-73 280.0 212 68.9
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 9.2e-73 277.7 196 73.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.6e-72 276.9 196 72.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 2.1e-72 276.6 182 74.7
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 3.5e-72 275.8 232 62.5
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 4.6e-72 275.4 189 74.6
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 4.6e-72 275.4 196 72.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 6.0e-72 275.0 193 70.5
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 6.0e-72 275.0 221 64.3
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 7.8e-72 274.6 183 73.8
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 7.8e-72 274.6 226 65.0
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.0e-71 274.2 225 67.6
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.3e-71 273.9 206 68.0
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.7e-71 273.5 240 61.2
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.3e-71 273.1 194 70.6
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.1e-71 271.9 187 71.1
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 6.6e-71 271.6 206 67.5
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.9e-70 270.0 251 60.2
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.5e-70 269.6 203 65.5
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 2.5e-70 269.6 183 73.8
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 2.5e-70 269.6 208 66.8
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 4.3e-70 268.9 243 59.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 4.3e-70 268.9 232 62.5
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 5.6e-70 268.5 206 67.0
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 5.6e-70 268.5 178 76.4
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 5.6e-70 268.5 182 72.5
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 7.3e-70 268.1 184 71.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 7.3e-70 268.1 192 69.8
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 9.6e-70 267.7 206 67.0
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.2e-69 267.3 202 67.3
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.6e-69 266.9 185 71.9
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 2.1e-69 266.5 190 69.5
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 4.7e-69 265.4 209 66.0
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 4.7e-69 265.4 221 64.7
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 4.7e-69 265.4 192 67.7
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.1e-68 264.2 206 65.5
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.8e-68 263.5 269 57.2
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 2.4e-68 263.1 229 61.6
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 2.4e-68 263.1 219 65.3
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.5e-67 260.4 183 68.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 6.4e-66 255.0 212 62.7
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 3.2e-65 252.7 176 71.6
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 6.0e-64 248.4 233 60.1
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 6.0e-64 248.4 194 67.5
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.6e-61 240.4 190 69.5
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 6.2e-61 238.4 192 64.6
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 4.9e-58 228.8 326 43.9
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.1e-57 227.6 232 53.9
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.4e-57 226.5 206 60.2
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.2e-57 225.7 232 53.4
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.1e-52 211.1 236 53.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.8e-52 210.3 158 71.5
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.8e-52 210.3 132 74.2
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.4e-52 209.9 236 53.0
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 9.9e-51 204.5 140 72.9
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 6.4e-50 201.8 209 56.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.3e-47 193.4 165 60.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 6.7e-47 191.8 185 56.8
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.5e-46 189.9 172 61.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.3e-46 189.5 98 99.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.1e-44 184.5 185 55.7
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.4e-44 184.1 128 70.3
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 2.6e-43 179.9 119 74.8
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.7e-42 177.2 122 72.1
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 7.9e-40 168.3 145 63.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 2.3e-39 166.8 177 51.4
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 3.9e-39 166.0 152 59.9
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.6e-37 160.6 109 75.2
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.2e-37 160.2 142 61.3
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 3.7e-37 159.5 130 64.6
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.1e-36 157.9 191 47.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.2e-34 150.2 142 59.9
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 8.5e-34 148.3 106 69.8
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.7e-26 124.0 170 44.7
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.7e-26 124.0 109 59.6
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.0e-23 113.2 152 45.4
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 1.2e-16 91.3 47 93.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.2e-16 91.3 52 78.8
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.7e-16 89.4 58 75.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 6.7e-15 85.5 170 35.3
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 1.1e-14 84.7 63 58.7
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.7e-10 70.9 54 55.6
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.9e-10 70.1 48 64.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 2.5e-09 67.0 43 74.4
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.0e-07 61.6 100 41.0
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 5.7e-06 55.8 60 46.7


User provided reference genes

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