Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.5e-150 535.4 274 100.0
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.9e-85 319.3 196 86.2
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 4.0e-39 166.0 266 42.9
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 5.3e-23 112.5 158 42.4
FvH4_7g03791 Fragaria vesca HOM05D008011 ORTHO05D012874 1.0e-21 108.2 72 76.4
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 2.2e-21 107.1 201 34.3
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 1.4e-20 104.4 201 32.8
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 1.9e-20 104.0 200 35.5
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 3.2e-20 103.2 176 35.2
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 4.2e-20 102.8 236 31.4
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 6.1e-19 99.0 218 31.2
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.8e-18 97.4 218 33.9
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 2.3e-18 97.1 191 33.5
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 5.1e-18 95.9 196 32.1
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 7.4e-17 92.0 140 39.3
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 1.3e-16 91.3 107 44.9
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 2.2e-16 90.5 186 32.8
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 4.8e-16 89.4 164 36.0
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 5.3e-15 85.9 88 48.9
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.2e-14 84.7 124 39.5
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 2.6e-14 83.6 182 31.9
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 2.6e-14 83.6 94 44.7
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.3e-13 81.3 170 31.2
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 8.5e-13 78.6 81 46.9
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 2.5e-12 77.0 181 32.6
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.2e-12 76.6 104 46.2
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 4.2e-12 76.3 181 30.9
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 7.2e-12 75.5 181 30.4
Rhsim02G0190400 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.6e-11 74.3 185 34.1
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 2.1e-11 73.9 182 31.3
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.7e-11 73.6 78 46.2
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.7e-11 73.6 157 36.3
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 3.6e-11 73.2 180 31.1
QL10p009726 Quercus lobata HOM05D020907 ORTHO05D010031 3.6e-11 73.2 166 30.7
QL10p009707 Quercus lobata HOM05D020907 ORTHO05D010031 4.7e-11 72.8 166 30.1
QL10p009746 Quercus lobata HOM05D020907 ORTHO05D010031 4.7e-11 72.8 166 30.7
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 6.1e-11 72.4 161 30.4
QL10p009756 Quercus lobata HOM05D020907 ORTHO05D010031 6.1e-11 72.4 166 30.7
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.8e-10 70.9 160 33.1
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.3e-10 70.5 179 31.3
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.0e-10 70.1 163 27.0
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.0e-10 70.1 94 45.7
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.0e-10 70.1 177 29.9
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 5.1e-10 69.3 166 33.7
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 5.1e-10 69.3 166 33.7
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 8.8e-10 68.6 164 30.5
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 8.8e-10 68.6 167 30.5
Rhsim02G0192200 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.1e-09 68.2 165 35.8
RhsimUnG0071700 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.5e-09 67.8 92 43.5
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 2.0e-09 67.4 91 37.4
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 2.6e-09 67.0 180 31.1
RhsimUnG0218700 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.3e-09 66.6 128 35.9
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.2e-08 63.9 170 31.2
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 2.4e-07 60.5 160 26.9
Cc06_g13000 Coffea canephora HOM05D010238 ORTHO05D010031 5.3e-07 59.3 105 36.2
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 4.5e-06 56.2 166 30.7


User provided reference genes

Program Settings