Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1829 Fragaria x ananassa HOM05D003297 ORTHO05D004027 7.7e-58 226.9 110 100.0
FAN10G0806 Fragaria x ananassa HOM05D003297 ORTHO05D004027 2.4e-43 178.7 86 98.8
FvH4_6g20890 Fragaria vesca HOM05D003297 ORTHO05D004027 2.1e-39 165.6 90 91.1
FAN03G2227 Fragaria x ananassa HOM05D003297 ORTHO05D004027 2.1e-39 165.6 87 93.1
FAN05G2878 Fragaria x ananassa HOM05D003297 ORTHO05D004027 2.1e-39 165.6 90 91.1
FAN05G2899 Fragaria x ananassa HOM05D003297 ORTHO05D004027 2.1e-39 165.6 90 91.1
RcHm_v2.0_Chr3g0477241 Rosa chinensis HOM05D003297 ORTHO05D004027 1.4e-38 162.9 90 88.9
FAN14G3337 Fragaria x ananassa HOM05D003297 ORTHO05D004027 2.3e-38 162.2 88 89.8
FAN06G2104 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.6e-34 149.4 89 86.5
TWI36G1507 Tripterygium wilfordii HOM05D003297 ORTHO05D004027 1.6e-34 149.4 90 80.0
Prupe.3G302500 Prunus persica HOM05D003297 ORTHO05D004027 2.7e-34 148.7 90 80.0
Prupe.6G027300 Prunus persica HOM05D003297 ORTHO05D004027 6.0e-34 147.5 90 77.8
MD09G1015300 Malus domestica HOM05D003297 ORTHO05D004027 7.8e-34 147.1 90 78.9
MD17G1015400 Malus domestica HOM05D003297 ORTHO05D004027 7.8e-34 147.1 90 78.9
Atru.chr6.2513 Acer truncatum HOM05D003297 ORTHO05D004027 1.0e-33 146.7 90 80.0
Ciclev10016373m.g Citrus clementina HOM05D003297 ORTHO05D004027 2.3e-33 145.6 90 77.8
Lalb_Chr06g0174311 Lupinus albus HOM05D003297 ORTHO05D004027 2.3e-33 145.6 90 77.8
PGR083G1628 Punica granatum HOM05D003297 ORTHO05D004027 3.0e-33 145.2 90 78.9
arahy.Tifrunner.gnm1.ann1.G51SBL Arachis hypogaea HOM05D003297 ORTHO05D004027 5.0e-33 144.4 91 78.0
Eucgr.J02308 Eucalyptus grandis HOM05D003297 ORTHO05D004027 6.6e-33 144.1 90 76.7
arahy.Tifrunner.gnm1.ann1.5QR84K Arachis hypogaea HOM05D003297 ORTHO05D004027 1.1e-32 143.3 91 78.0
arahy.Tifrunner.gnm1.ann1.IZLP0D Arachis hypogaea HOM05D003297 ORTHO05D004027 1.5e-32 142.9 91 76.9
Dinv25678 Davidia involucrata HOM05D003297 ORTHO05D004027 1.5e-32 142.9 90 77.8
GSVIVG01001822001 Vitis vinifera HOM05D003297 ORTHO05D004027 1.5e-32 142.9 90 77.8
Lsat_1_v5_gn_0_14320 Lactuca sativa HOM05D003297 ORTHO05D004027 2.5e-32 142.1 90 75.6
Actinidia38211 Actinidia chinensis HOM05D003297 ORTHO05D004027 3.3e-32 141.7 90 76.7
DCAR_021763 Daucus carota HOM05D003297 ORTHO05D004027 3.3e-32 141.7 90 76.7
Lj7A608T45 Lonicera japonica HOM05D003297 ORTHO05D004027 3.3e-32 141.7 90 76.7
QL02p072446 Quercus lobata HOM05D003297 ORTHO05D004027 3.3e-32 141.7 89 76.4
Lj1g0013881 Lotus japonicus HOM05D003297 ORTHO05D004027 4.3e-32 141.4 90 75.6
Lj4g0023257 Lotus japonicus HOM05D003297 ORTHO05D004027 4.3e-32 141.4 90 76.7
Cfa007254 Carpinus fangiana HOM05D003297 ORTHO05D004027 5.6e-32 141.0 90 75.6
Haze_14833 Corylus avellana HOM05D003297 ORTHO05D004027 5.6e-32 141.0 90 75.6
HanXRQChr17g0550191 Helianthus annuus HOM05D003297 ORTHO05D004027 5.6e-32 141.0 90 74.4
CANSAT64G0772 Cannabis sativa HOM05D003297 ORTHO05D004027 9.5e-32 140.2 90 75.6
Sed0027775 Sechium edule HOM05D003297 ORTHO05D004027 9.5e-32 140.2 91 75.8
CiPaw.03G052300 Carya illinoinensis HOM05D003297 ORTHO05D004027 1.2e-31 139.8 91 78.0
Potri.001G334100 Populus trichocarpa HOM05D003297 ORTHO05D004027 2.8e-31 138.7 89 77.5
Duzib147G0281 Durio zibethinus HOM05D003297 ORTHO05D004027 3.6e-31 138.3 90 74.4
Hma1.2p1_0172F.1_g076190 Hydrangea macrophylla HOM05D003297 ORTHO05D004027 6.2e-31 137.5 90 72.2
Manes.17G106000 Manihot esculenta HOM05D003297 ORTHO05D004027 6.2e-31 137.5 90 73.3
Medtr2g034610 Medicago truncatula HOM05D003297 ORTHO05D004027 6.2e-31 137.5 90 73.3
Thecc.04G030000 Theobroma cacao HOM05D003297 ORTHO05D004027 6.2e-31 137.5 91 75.8
ECA246G0154 Erigeron canadensis HOM05D003297 ORTHO05D004027 1.1e-30 136.7 90 73.3
HanXRQChr17g0534591 Helianthus annuus HOM05D003297 ORTHO05D004027 1.1e-30 136.7 90 73.3
Sabra16G0215200 Salix brachista HOM05D003297 ORTHO05D004027 1.1e-30 136.7 91 75.8
Aqoxy3G01473 Aquilegia oxysepala HOM05D003297 ORTHO05D004027 2.3e-30 135.6 91 74.7
TPR.G5775 Trifolium pratense HOM05D003297 ORTHO05D004027 2.3e-30 135.6 90 73.3
ClCG08G000860 Citrullus lanatus HOM05D003297 ORTHO05D004027 3.1e-30 135.2 92 76.1
Duzib264G0931 Durio zibethinus HOM05D003297 ORTHO05D004027 4.0e-30 134.8 91 74.7
COL.COLO4_08765 Corchorus olitorius HOM05D003297 ORTHO05D004027 5.2e-30 134.4 90 71.1
HanXRQChr17g0534631 Helianthus annuus HOM05D003297 ORTHO05D004027 5.2e-30 134.4 89 73.0
HanXRQChr17g0550181 Helianthus annuus HOM05D003297 ORTHO05D004027 5.2e-30 134.4 90 71.1
Psat1g161760 Pisum sativum HOM05D003297 ORTHO05D004027 5.2e-30 134.4 90 74.4
vmacro05937 Vaccinium macrocarpon HOM05D003297 ORTHO05D004027 5.2e-30 134.4 90 72.2
Glyma.19G075600 Glycine max HOM05D003297 ORTHO05D004027 6.8e-30 134.0 90 74.4
Gohir.A05G340500 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.2e-29 133.3 91 75.8
Rhsim10G0008800 Rhododendron simsii HOM05D003297 ORTHO05D004027 1.2e-29 133.3 90 71.1
Nitab4.5_0003600g0020 Nicotiana tabacum HOM05D003297 ORTHO05D004027 1.5e-29 132.9 90 70.0
CAN.G1161.37 Capsicum annuum HOM05D003297 ORTHO05D004027 2.0e-29 132.5 89 73.0
Peaxi162Scf00003g04521 Petunia axillaris HOM05D003297 ORTHO05D004027 2.0e-29 132.5 90 70.0
CSS0009984 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 2.6e-29 132.1 91 73.6
Lsat_1_v5_gn_2_94421 Lactuca sativa HOM05D003297 ORTHO05D004027 2.6e-29 132.1 90 73.3
Rhsim06G0126200 Rhododendron simsii HOM05D003297 ORTHO05D004027 2.6e-29 132.1 90 71.1
Solyc10g078830.2 Solanum lycopersicum HOM05D003297 ORTHO05D004027 2.6e-29 132.1 90 71.1
Sopen10g029470 Solanum pennellii HOM05D003297 ORTHO05D004027 2.6e-29 132.1 90 71.1
PGSC0003DMG400011416 Solanum tuberosum HOM05D003297 ORTHO05D004027 2.6e-29 132.1 90 71.1
TAR371G0644 Trochodendron aralioides HOM05D003297 ORTHO05D004027 2.6e-29 132.1 91 75.8
Peaxi162Scf00304g00127 Petunia axillaris HOM05D003297 ORTHO05D004027 3.4e-29 131.7 90 70.0
TAR376G0821 Trochodendron aralioides HOM05D003297 ORTHO05D004027 3.4e-29 131.7 91 74.7
Gohir.D09G035200 Gossypium hirsutum HOM05D003297 ORTHO05D004027 4.4e-29 131.3 88 72.7
Gorai.012G088800 Gossypium raimondii HOM05D003297 ORTHO05D004027 4.4e-29 131.3 91 74.7
CSS0027121 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 5.8e-29 131.0 90 73.3
HanXRQChr15g0474721 Helianthus annuus HOM05D003297 ORTHO05D004027 5.8e-29 131.0 90 72.2
MELO3C022190.2 Cucumis melo HOM05D003297 ORTHO05D004027 7.5e-29 130.6 88 73.9
Migut.H00013 Erythranthe guttata HOM05D003297 ORTHO05D004027 7.5e-29 130.6 90 70.0
Phvul.010G007000 Phaseolus vulgaris HOM05D003297 ORTHO05D004027 7.5e-29 130.6 90 73.3
CsaV3_3G044040 Cucumis sativus L. HOM05D003297 ORTHO05D004027 9.9e-29 130.2 85 75.3
Thhalv10014458m.g Eutrema salsugineum HOM05D003297 ORTHO05D004027 9.9e-29 130.2 94 72.3
Cpa.g.sc130.8 Carica papaya HOM05D003297 ORTHO05D004027 1.7e-28 129.4 91 75.8
Glyma.12G242000 Glycine max HOM05D003297 ORTHO05D004027 1.7e-28 129.4 91 73.6
HanXRQChr15g0474981 Helianthus annuus HOM05D003297 ORTHO05D004027 1.7e-28 129.4 92 71.7
PSO017G7282 Papaver somniferum HOM05D003297 ORTHO05D004027 1.7e-28 129.4 90 67.8
PSO541G1060 Papaver somniferum HOM05D003297 ORTHO05D004027 1.7e-28 129.4 90 66.7
PSO675G2052 Papaver somniferum HOM05D003297 ORTHO05D004027 1.7e-28 129.4 90 66.7
Cc05_g01780 Coffea canephora HOM05D003297 ORTHO05D004027 2.2e-28 129.0 90 70.0
Cc05_g01790 Coffea canephora HOM05D003297 ORTHO05D004027 2.2e-28 129.0 90 70.0
Sp6g29790 Schrenkiella parvula HOM05D003297 ORTHO05D004027 2.2e-28 129.0 94 71.3
Nn1g00668 Nelumbo nucifera HOM05D003297 ORTHO05D004027 2.9e-28 128.6 92 70.7
Gohir.D04G078900 Gossypium hirsutum HOM05D003297 ORTHO05D004027 3.7e-28 128.3 91 73.6
CSS0005089 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 4.9e-28 127.9 89 71.9
Nitab4.5_0004643g0030 Nicotiana tabacum HOM05D003297 ORTHO05D004027 4.9e-28 127.9 90 70.0
Hund04990 Selenicereus undatus HOM05D003297 ORTHO05D004027 4.9e-28 127.9 90 68.9
Nitab4.5_0000105g0150 Nicotiana tabacum HOM05D003297 ORTHO05D004027 6.4e-28 127.5 90 70.0
PSO478G3807 Papaver somniferum HOM05D003297 ORTHO05D004027 6.4e-28 127.5 90 66.7
Peaxi162Scf00480g00212 Petunia axillaris HOM05D003297 ORTHO05D004027 6.4e-28 127.5 90 68.9
Gorai.006G040100 Gossypium raimondii HOM05D003297 ORTHO05D004027 8.3e-28 127.1 88 70.5
Sc03g0006810 Simmondsia chinensis HOM05D003297 ORTHO05D004027 8.3e-28 127.1 91 68.1
THA.LOC104822413 Tarenaya hassleriana HOM05D003297 ORTHO05D004027 8.3e-28 127.1 91 70.3
BcaB01g06337 Brassica carinata HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
BcaC04g19050 Brassica carinata HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
A10p24230 Brassica napus HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
C09p62920 Brassica napus HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
BolC9t59129H Brassica oleracea HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
BraA10t44488Z Brassica rapa HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 70.2
Carub.0006s1244 Capsella rubella HOM05D003297 ORTHO05D004027 1.4e-27 126.3 94 69.1
Gohir.A09G034300 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.4e-27 126.3 88 70.5
Aa31LG11G15030 Aethionema arabicum HOM05D003297 ORTHO05D004027 1.9e-27 125.9 94 69.1
AL6G24920 Arabidopsis lyrata HOM05D003297 ORTHO05D004027 3.2e-27 125.2 94 68.1
A03p06500 Brassica napus HOM05D003297 ORTHO05D004027 3.2e-27 125.2 94 69.1
BraA03t09982Z Brassica rapa HOM05D003297 ORTHO05D004027 3.2e-27 125.2 94 69.1
BcaB01g05299 Brassica carinata HOM05D003297 ORTHO05D004027 4.1e-27 124.8 94 69.1
BcaB08g36969 Brassica carinata HOM05D003297 ORTHO05D004027 4.1e-27 124.8 94 69.1
C03p07500 Brassica napus HOM05D003297 ORTHO05D004027 4.1e-27 124.8 94 69.1
BolC3t13251H Brassica oleracea HOM05D003297 ORTHO05D004027 4.1e-27 124.8 94 69.1
AT5G14240 Arabidopsis thaliana HOM05D003297 ORTHO05D004027 7.1e-27 124.0 94 67.0
CARHR103230 Cardamine hirsuta HOM05D003297 ORTHO05D004027 1.6e-26 122.9 94 67.0
CARHR199100 Cardamine hirsuta HOM05D003297 ORTHO05D004027 1.6e-26 122.9 94 67.0
AUR62001824 Chenopodium quinoa HOM05D003297 ORTHO05D004027 2.1e-26 122.5 91 67.0
HanXRQChr17g0534611 Helianthus annuus HOM05D003297 ORTHO05D004027 2.7e-26 122.1 90 68.9
MSTRG.3093 Avicennia marina HOM05D003297 ORTHO05D004027 3.5e-26 121.7 90 68.9
ATR1136G208 Amborella trichopoda HOM05D003297 ORTHO05D004027 4.6e-26 121.3 91 67.0
unitig_0.g1941 Utricularia gibba HOM05D003297 ORTHO05D004027 6.0e-26 120.9 84 66.7
FAN01G2972 Fragaria x ananassa HOM05D003297 ORTHO05D004027 7.8e-26 120.6 94 68.1
Migut.D01746 Erythranthe guttata HOM05D003297 ORTHO05D004027 1.0e-25 120.2 90 66.7
Phvul.004G055600 Phaseolus vulgaris HOM05D003297 ORTHO05D004027 1.7e-25 119.4 90 66.7
Ah.16g107000 Amaranthus hybridus HOM05D003297 ORTHO05D004027 3.0e-25 118.6 91 64.8
Os01g0184800 Oryza sativa ssp. japonica HOM05D003297 ORTHO05D004027 5.1e-25 117.9 91 62.6
CDE07G0254 Ceratophyllum demersum HOM05D003297 ORTHO05D004027 1.1e-24 116.7 86 65.1
Oeu058767.1 Olea europaea HOM05D003297 ORTHO05D004027 1.1e-24 116.7 108 56.5
Nn3g16636 Nelumbo nucifera HOM05D003297 ORTHO05D004027 1.5e-24 116.3 91 65.9
EL10Ac8g19289 Beta vulgaris HOM05D003297 ORTHO05D004027 1.9e-24 115.9 91 63.7
EL10Ac9g22681 Beta vulgaris HOM05D003297 ORTHO05D004027 1.9e-24 115.9 91 63.7
Hund18929 Selenicereus undatus HOM05D003297 ORTHO05D004027 1.9e-24 115.9 73 69.9
CSS0020533 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 2.5e-24 115.5 103 61.2
AUR62009611 Chenopodium quinoa HOM05D003297 ORTHO05D004027 3.3e-24 115.2 89 62.9
CDE04G3082 Ceratophyllum demersum HOM05D003297 ORTHO05D004027 5.6e-24 114.4 85 64.7
PSO541G1735 Papaver somniferum HOM05D003297 ORTHO05D004027 5.6e-24 114.4 89 58.4
RcHm_v2.0_Chr6g0252661 Rosa chinensis HOM05D003297 ORTHO05D004027 8.1e-23 110.5 56 87.5
MBI15_g24202_MAGBIO Magnolia biondii HOM05D003297 ORTHO05D004027 4.0e-22 108.2 88 61.4
SGA_v2.0_scaffold18G08223 Striga asiatica HOM05D003297 ORTHO05D004027 1.5e-21 106.3 107 54.2
CSS0031371 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 1.7e-20 102.8 94 57.4
SEGI_15348 Sequoiadendron giganteum HOM05D003297 ORTHO05D004027 1.6e-18 96.3 90 58.9
RcHm_v2.0_Chr3g0477231 Rosa chinensis HOM05D003297 ORTHO05D004027 3.5e-18 95.1 228 33.3
Aqoxy6G01653 Aquilegia oxysepala HOM05D003297 ORTHO05D004027 1.9e-16 89.4 88 56.8
Lsat_1_v5_gn_1_126600 Lactuca sativa HOM05D003297 ORTHO05D004027 1.9e-16 89.4 68 60.3
A02p02390 Brassica napus HOM05D003297 ORTHO05D004027 9.6e-16 87.0 75 62.7
BcaC03g13509 Brassica carinata HOM05D003297 ORTHO05D004027 2.1e-15 85.9 52 71.2
BcaNung03173 Brassica carinata HOM05D003297 ORTHO05D004027 2.1e-15 85.9 52 71.2
Potri.017G066200 Populus trichocarpa HOM05D003297 ORTHO05D004027 2.8e-15 85.5 75 60.0
SMO147G0291 Selaginella moellendorffii HOM05D003297 ORTHO05D004027 2.8e-15 85.5 85 55.3
AagrBONN_evm.TU.Sc2ySwM_368.1649 Anthoceros agrestis HOM05D003297 ORTHO05D004027 5.2e-14 81.3 89 51.7
HPP92_005181 Vanilla planifolia HOM05D003297 ORTHO05D004027 9.0e-14 80.5 91 52.7
Mapoly0059s0038 Marchantia polymorpha HOM05D003297 ORTHO05D004027 2.6e-13 79.0 90 52.2
BraA02t05209Z Brassica rapa HOM05D003297 ORTHO05D004027 3.4e-13 78.6 71 63.4
Pp3c2_20640 Physcomitrium patens HOM05D003297 ORTHO05D004027 4.4e-13 78.2 86 50.0
arahy.Tifrunner.gnm1.ann1.PXFG7S Arachis hypogaea HOM05D003297 ORTHO05D004027 1.7e-12 76.3 40 77.5
SGA_v2.0_scaffold481G52325 Striga asiatica HOM05D003297 ORTHO05D004027 2.9e-12 75.5 41 75.6
Lj5A712T32 Lonicera japonica HOM05D003297 ORTHO05D004027 4.2e-11 71.6 38 78.9
RcHm_v2.0_Chr2g0174741 Rosa chinensis HOM05D003297 ORTHO05D004027 1.2e-10 70.1 55 63.6
FAN06G1012 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.6e-10 69.7 89 48.3
CAN.G1161.54 Capsicum annuum HOM05D000052 ORTHO05D000046 7.8e-10 67.4 49 61.2
RcHm_v2.0_Chr1g0359641 Rosa chinensis HOM05D003297 ORTHO05D004027 1.3e-09 66.6 34 79.4
arahy.Tifrunner.gnm1.ann1.BJ0JYY Arachis hypogaea HOM05D003297 ORTHO05D004027 3.0e-09 65.5 38 73.7
Oeu050424.1 Olea europaea HOM05D003297 ORTHO05D004027 3.9e-09 65.1 44 68.2
arahy.Tifrunner.gnm1.ann1.6W6YW6 Arachis hypogaea HOM05D003297 ORTHO05D004027 5.1e-09 64.7 38 73.7
arahy.Tifrunner.gnm1.ann1.BC5FZ3 Arachis hypogaea HOM05D003297 ORTHO05D004027 1.5e-08 63.2 38 71.1
arahy.Tifrunner.gnm1.ann1.J9253V Arachis hypogaea HOM05D003297 ORTHO05D004027 1.5e-08 63.2 37 70.3
C02p06630 Brassica napus HOM05D003297 ORTHO05D004027 1.9e-08 62.8 57 64.9
Cre06.g291900 Chlamydomonas reinhardtii HOM05D003297 ORTHO05D004027 9.6e-08 60.5 93 38.7
arahy.Tifrunner.gnm1.ann1.GNZ56R Arachis hypogaea HOM05D003297 ORTHO05D004027 4.8e-07 58.2 36 66.7
Sabra17G0062400 Salix brachista HOM05D003297 ORTHO05D004027 9.0e-06 53.9 80 42.5


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