Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.5e-210 736.1 409 100.0
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 8.0e-209 730.3 409 99.3
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 6.8e-200 700.7 414 95.7
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.5e-191 672.9 409 93.4
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 1.9e-189 666.0 409 91.2
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.2e-183 646.7 521 75.4
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 1.8e-144 516.5 421 73.4
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 1.4e-136 490.3 404 71.8
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 9.1e-128 461.1 409 65.8
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 1.1e-120 437.6 407 63.1
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 7.0e-120 434.9 343 67.9
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 2.0e-119 433.3 339 66.1
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 1.0e-118 431.0 408 61.3
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.3e-118 430.6 349 65.3
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 1.7e-118 430.3 336 68.8
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 3.8e-118 429.1 408 61.5
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 3.8e-118 429.1 345 66.1
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 6.5e-118 428.3 408 63.7
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 1.6e-116 423.7 333 65.8
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 2.7e-116 422.9 406 64.0
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 2.3e-115 419.9 340 65.9
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 3.9e-115 419.1 344 65.1
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 3.9e-115 419.1 410 61.5
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 2.0e-114 416.8 334 65.6
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 3.3e-114 416.0 338 65.1
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 2.8e-113 412.9 336 67.0
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 8.2e-113 411.4 410 62.4
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 5.3e-112 408.7 324 65.1
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 2.6e-111 406.4 357 61.9
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 5.9e-111 405.2 329 64.4
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.0e-110 404.4 358 62.0
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 1.0e-110 404.4 343 63.6
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 1.7e-110 403.7 420 59.5
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 6.5e-110 401.7 332 64.2
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 6.5e-110 401.7 319 64.9
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 2.5e-109 399.8 327 64.5
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 4.2e-109 399.1 330 64.2
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 4.2e-109 399.1 340 62.1
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 4.2e-109 399.1 422 60.9
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 4.2e-109 399.1 411 56.7
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 5.5e-109 398.7 407 60.2
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 5.5e-109 398.7 338 61.5
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 9.4e-109 397.9 420 58.3
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.1e-108 396.7 330 63.9
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 2.7e-108 396.4 406 63.5
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 4.7e-108 395.6 408 60.0
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 6.1e-108 395.2 409 55.0
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 8.0e-108 394.8 334 62.6
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 1.0e-107 394.4 337 62.0
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 1.0e-107 394.4 328 63.7
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 1.0e-107 394.4 398 61.1
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.0e-107 394.4 395 59.2
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.4e-107 394.0 337 63.2
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 1.8e-107 393.7 338 61.8
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 1.8e-107 393.7 438 52.5
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 2.3e-107 393.3 408 56.1
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 3.0e-107 392.9 332 63.3
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 3.0e-107 392.9 343 62.4
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 4.0e-107 392.5 330 63.6
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 6.8e-107 391.7 406 57.1
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 1.2e-106 391.0 412 57.3
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 2.6e-106 389.8 329 63.2
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 3.4e-106 389.4 337 61.1
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 7.5e-106 388.3 338 61.8
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 9.7e-106 387.9 333 63.7
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 9.7e-106 387.9 406 61.8
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 1.7e-105 387.1 318 63.8
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 2.2e-105 386.7 333 61.9
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 1.4e-104 384.0 329 62.0
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.8e-104 383.6 331 62.8
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 2.4e-104 383.3 321 63.9
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 3.1e-104 382.9 416 58.4
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 4.1e-104 382.5 375 57.1
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 5.3e-104 382.1 343 60.9
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 5.3e-104 382.1 440 56.1
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 7.0e-104 381.7 333 62.2
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 4.5e-103 379.0 329 61.7
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 4.5e-103 379.0 329 61.7
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 7.7e-103 378.3 417 55.2
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.3e-102 377.5 419 58.9
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 5.0e-102 375.6 416 57.0
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 5.5e-101 372.1 340 60.6
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 3.6e-100 369.4 308 62.7
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 1.0e-99 367.9 393 58.3
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 2.3e-99 366.7 320 61.2
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 4.0e-99 365.9 359 56.5
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.5e-98 364.0 411 56.7
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 1.5e-98 364.0 350 58.3
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 2.6e-98 363.2 324 60.8
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 2.6e-98 363.2 324 61.1
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 1.7e-97 360.5 349 57.9
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 1.7e-97 360.5 358 55.0
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 8.3e-97 358.2 414 51.2
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 2.4e-96 356.7 300 62.7
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 3.5e-95 352.8 331 56.2
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 3.5e-95 352.8 296 64.2
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 2.3e-94 350.1 344 57.0
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 2.9e-94 349.7 287 64.8
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 5.0e-94 349.0 295 61.4
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 6.6e-94 348.6 376 52.7
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 3.3e-93 346.3 227 93.0
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 2.8e-92 343.2 343 55.7
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 1.8e-91 340.5 419 50.8
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 2.3e-91 340.1 337 55.5
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 1.4e-88 330.9 429 51.0
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 2.3e-86 323.6 304 57.2
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 3.9e-86 322.8 318 55.3
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 3.3e-85 319.7 349 51.9
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 9.5e-85 318.2 304 57.9
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.1e-80 304.7 311 55.6
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 3.2e-80 303.1 229 83.0
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 3.5e-79 299.7 312 54.8
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 4.0e-75 286.2 298 55.4
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 6.6e-70 268.9 231 62.3
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 1.8e-67 260.8 216 65.7
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 4.9e-65 252.7 214 60.7
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 8.6e-62 241.9 326 41.4
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 3.1e-59 233.4 337 41.8
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 1.6e-52 211.1 231 56.7
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 5.8e-50 202.6 315 43.2
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 1.5e-42 177.9 142 67.6
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 3.5e-39 166.8 118 76.3
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.3e-38 164.9 186 60.2
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.1e-36 157.5 165 55.8
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 2.0e-34 151.0 174 49.4
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 2.9e-33 147.1 281 34.2
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 3.8e-33 146.7 351 31.6
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.5e-32 144.1 122 59.8
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 7.1e-32 142.5 367 29.7
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 3.9e-30 136.7 221 43.4
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 2.5e-29 134.0 98 68.4
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 9.6e-29 132.1 142 61.3
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 2.0e-26 124.4 176 46.6
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 2.0e-26 124.4 119 58.0
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 6.1e-23 112.8 69 81.2
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-21 108.6 95 72.6
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 6.3e-20 102.8 60 86.7
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 3.1e-19 100.5 77 64.9
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 4.1e-19 100.1 73 72.6
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 5.3e-19 99.8 68 73.5
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 1.5e-18 98.2 69 63.8
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 3.4e-18 97.1 89 58.4
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 1.7e-17 94.7 197 35.5
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 4.2e-16 90.1 335 25.7
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 5.5e-16 89.7 174 34.5
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 9.4e-16 89.0 61 67.2
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 2.5e-13 80.9 63 68.3
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 4.8e-12 76.6 67 64.2
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 1.2e-10 72.0 64 62.5
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 2.6e-10 70.9 115 30.4
MD07G1073400 Malus domestica HOM05D001638 ORTHO05D005197 2.9e-09 67.4 66 59.1
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 1.4e-08 65.1 116 41.4
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 1.9e-08 64.7 418 24.2
FAN06G4046 Fragaria x ananassa HOM05D001638 ORTHO05D005197 4.7e-07 60.1 99 43.4


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