Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-46 189.5 98 100.0
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-46 189.5 98 100.0
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.7e-44 179.9 98 94.9
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.4e-39 166.0 89 95.5
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-38 162.9 95 87.4
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.2e-35 150.2 91 84.6
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 1.8e-34 149.1 95 81.1
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 9.1e-34 146.7 91 82.4
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.1e-34 146.7 91 82.4
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-33 146.4 84 90.5
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-33 146.4 84 90.5
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 3.0e-29 131.7 86 79.1
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.0e-28 129.0 89 76.4
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 2.6e-28 128.6 94 72.3
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 7.4e-28 127.1 94 75.5
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 3.7e-27 124.8 84 77.4
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 6.3e-27 124.0 95 70.5
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 1.5e-25 119.4 95 69.5
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 2.0e-25 119.0 95 66.3
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 4.5e-25 117.9 82 73.2
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 5.9e-25 117.5 93 69.9
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 7.7e-25 117.1 95 69.5
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.3e-24 116.3 92 69.6
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 1.7e-24 115.9 84 72.6
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.9e-24 115.2 96 66.7
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.9e-24 115.2 96 66.7
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 2.9e-24 115.2 95 68.4
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 5.0e-24 114.4 82 70.7
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 6.5e-24 114.0 92 68.5
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 6.5e-24 114.0 92 68.5
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 6.5e-24 114.0 84 72.6
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 8.5e-24 113.6 84 69.0
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 8.5e-24 113.6 96 60.4
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 1.1e-23 113.2 93 68.8
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 1.1e-23 113.2 93 67.7
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 1.5e-23 112.8 84 69.0
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 1.5e-23 112.8 80 76.2
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 1.9e-23 112.5 96 63.5
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 1.9e-23 112.5 97 62.9
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 2.5e-23 112.1 84 71.4
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 2.5e-23 112.1 95 64.2
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 2.5e-23 112.1 93 67.7
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 3.2e-23 111.7 95 60.0
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 3.2e-23 111.7 84 70.2
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 5.5e-23 110.9 84 70.2
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 7.2e-23 110.5 84 67.9
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 7.2e-23 110.5 84 66.7
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 7.2e-23 110.5 84 67.9
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 7.2e-23 110.5 90 70.0
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 9.4e-23 110.2 94 63.8
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 9.4e-23 110.2 83 69.9
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 9.4e-23 110.2 80 70.0
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 1.2e-22 109.8 93 62.4
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 1.2e-22 109.8 94 59.6
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 1.6e-22 109.4 96 63.5
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.6e-22 109.4 95 64.2
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.6e-22 109.4 95 63.2
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 1.6e-22 109.4 95 62.1
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 2.1e-22 109.0 84 67.9
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 2.1e-22 109.0 84 67.9
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 2.1e-22 109.0 89 60.7
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 2.1e-22 109.0 95 64.2
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-22 108.6 84 65.5
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 2.7e-22 108.6 84 65.5
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 2.7e-22 108.6 84 65.5
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 2.7e-22 108.6 93 65.6
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 3.6e-22 108.2 84 67.9
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 3.6e-22 108.2 95 61.1
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 3.6e-22 108.2 84 65.5
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 4.7e-22 107.8 93 63.4
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 6.1e-22 107.5 84 67.9
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 6.1e-22 107.5 95 60.0
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 8.0e-22 107.1 84 64.3
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 1.0e-21 106.7 96 58.3
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.4e-21 106.3 92 60.9
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 1.8e-21 105.9 93 62.4
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 1.8e-21 105.9 92 63.0
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 1.8e-21 105.9 84 63.1
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-21 105.9 84 63.1
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 1.8e-21 105.9 84 66.7
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.8e-21 105.9 87 60.9
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 1.8e-21 105.9 97 61.9
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.8e-21 105.9 84 66.7
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 2.3e-21 105.5 93 62.4
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 4.0e-21 104.8 96 62.5
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 4.0e-21 104.8 95 58.9
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 5.2e-21 104.4 90 67.8
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 5.2e-21 104.4 95 57.9
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 5.2e-21 104.4 95 57.9
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 6.7e-21 104.0 101 59.4
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 8.8e-21 103.6 84 66.7
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 1.1e-20 103.2 104 57.7
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.1e-20 103.2 87 62.1
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.1e-20 103.2 87 62.1
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 1.1e-20 103.2 84 64.3
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 2.0e-20 102.4 83 66.3
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 2.0e-20 102.4 92 57.6
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 2.6e-20 102.1 84 63.1
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 2.6e-20 102.1 96 59.4
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 2.6e-20 102.1 91 59.3
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 3.3e-20 101.7 87 62.1
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 3.3e-20 101.7 93 61.3
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 4.4e-20 101.3 95 60.0
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 5.7e-20 100.9 86 59.3
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 7.4e-20 100.5 84 65.5
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 7.4e-20 100.5 84 65.5
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 9.7e-20 100.1 87 60.9
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 2.2e-19 99.0 78 60.3
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 2.2e-19 99.0 89 56.2
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 2.8e-19 98.6 84 58.3
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 4.8e-19 97.8 101 58.4
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 8.2e-19 97.1 89 60.7
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 8.2e-19 97.1 101 58.4
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 1.1e-18 96.7 85 62.4
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 1.8e-18 95.9 86 60.5
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 2.4e-18 95.5 75 68.0
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 2.4e-18 95.5 75 68.0
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 2.4e-18 95.5 75 68.0
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 3.1e-18 95.1 84 58.3
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 3.1e-18 95.1 79 60.8
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 4.1e-18 94.7 75 66.7
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 7.0e-18 94.0 95 55.8
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 1.2e-17 93.2 78 57.7
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 1.6e-17 92.8 75 66.7
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 4.5e-17 91.3 61 77.0
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 4.5e-17 91.3 93 57.0
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 7.7e-17 90.5 75 65.3
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 1.0e-16 90.1 79 60.8
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 5.0e-16 87.8 91 56.0
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 6.5e-16 87.4 75 65.3
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 6.5e-16 87.4 75 65.3
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 6.5e-16 87.4 62 79.0
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 1.1e-15 86.7 93 54.8
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.1e-15 86.7 79 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 4.2e-15 84.7 93 52.7
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 4.2e-15 84.7 84 57.1
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 7.2e-15 84.0 93 53.8
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 3.6e-14 81.6 84 54.8
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 6.1e-14 80.9 96 49.0
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.0e-13 80.1 84 52.4
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.0e-13 80.1 84 52.4
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.8e-13 79.3 79 55.7
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 5.2e-13 77.8 84 52.4
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 7.5e-12 73.9 39 92.3
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 2.2e-11 72.4 79 53.2
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 4.1e-10 68.2 87 47.1
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 9.1e-10 67.0 81 45.7
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 2.7e-09 65.5 59 64.4
FvH4_6g53790 Fragaria vesca HOM05D000047 ORTHO05D006740 1.1e-07 60.1 80 50.0
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 6.1e-06 54.3 36 69.4


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