Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1764 Fragaria x ananassa HOM05D000206 ORTHO05D002863 2.2e-70 268.9 139 100.0
FAN06G3499 Fragaria x ananassa HOM05D000206 ORTHO05D002863 2.6e-34 149.1 154 60.4
FAN03G0033 Fragaria x ananassa HOM05D000206 ORTHO05D002863 9.8e-34 147.1 154 63.0
FAN06G0804 Fragaria x ananassa HOM05D000206 ORTHO05D002863 9.8e-34 147.1 154 61.0
FvH4_7g14240 Fragaria vesca HOM05D000206 ORTHO05D002863 2.2e-33 146.0 145 62.1
FAN10G2354 Fragaria x ananassa HOM05D000206 ORTHO05D002863 2.2e-33 146.0 154 61.0
FAN01G3059 Fragaria x ananassa HOM05D000206 ORTHO05D002863 8.3e-33 144.1 154 60.4
RcHm_v2.0_Chr1g0355231 Rosa chinensis HOM05D000206 ORTHO05D002863 1.5e-29 133.3 143 58.7
MD01G1060300 Malus domestica HOM05D000206 ORTHO05D002863 2.2e-17 92.8 148 48.0
TAR636G0406 Trochodendron aralioides HOM05D000206 ORTHO05D002863 4.9e-17 91.7 151 47.7
Atru.chr5.490 Acer truncatum HOM05D000206 ORTHO05D002863 1.1e-16 90.5 148 45.3
TAR629G0287 Trochodendron aralioides HOM05D000206 ORTHO05D002863 1.4e-16 90.1 151 45.0
Lj9A583T64 Lonicera japonica HOM05D000206 ORTHO05D002863 4.2e-16 88.6 152 46.1
Actinidia20907 Actinidia chinensis HOM05D000206 ORTHO05D002863 5.4e-16 88.2 137 44.5
Actinidia10013 Actinidia chinensis HOM05D000206 ORTHO05D002863 7.1e-16 87.8 137 47.4
GSVIVG01026928001 Vitis vinifera HOM05D000206 ORTHO05D002863 4.6e-15 85.1 147 46.9
MSTRG.20828 Avicennia marina HOM05D000206 ORTHO05D002863 1.0e-14 84.0 149 41.6
Duzib205G0569 Durio zibethinus HOM05D000206 ORTHO05D002863 2.3e-14 82.8 152 46.1
CSS0030231 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002863 3.0e-14 82.4 154 44.2
QL08p048856 Quercus lobata HOM05D000206 ORTHO05D002863 3.0e-14 82.4 141 42.6
Haze_15499 Corylus avellana HOM05D000206 ORTHO05D002863 3.9e-14 82.0 149 43.0
Aqoxy7G00314 Aquilegia oxysepala HOM05D000206 ORTHO05D002863 5.1e-14 81.6 149 45.0
Dinv32480 Davidia involucrata HOM05D000206 ORTHO05D002863 8.7e-14 80.9 143 41.3
Hma1.2p1_0001F.1_g001470 Hydrangea macrophylla HOM05D000206 ORTHO05D002863 8.7e-14 80.9 148 43.9
vmacro13286 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 1.1e-13 80.5 135 41.5
Cfa003930 Carpinus fangiana HOM05D000206 ORTHO05D002863 2.5e-13 79.3 149 42.3
Manes.05G034600 Manihot esculenta HOM05D000206 ORTHO05D002863 3.3e-13 79.0 137 44.5
CiPaw.01G061000 Carya illinoinensis HOM05D000206 ORTHO05D002863 4.3e-13 78.6 149 38.9
Sabra14G0061000 Salix brachista HOM05D000206 ORTHO05D002863 4.3e-13 78.6 152 43.4
Thecc.03G152200 Theobroma cacao HOM05D000206 ORTHO05D002863 9.6e-13 77.4 149 44.3
CANSAT56G3139 Cannabis sativa HOM05D000206 ORTHO05D002863 4.8e-12 75.1 141 42.6
Ca_07917_v3 Cicer arietinum L. HOM05D000206 ORTHO05D002863 4.8e-12 75.1 148 43.2
TWI39G0926 Tripterygium wilfordii HOM05D000206 ORTHO05D002863 4.8e-12 75.1 151 37.7
MBI18_g04356_MAGBIO Magnolia biondii HOM05D000206 ORTHO05D002863 8.1e-12 74.3 151 43.7
Oeu061932.1 Olea europaea HOM05D000206 ORTHO05D002863 8.1e-12 74.3 151 40.4
Manes.14G037700 Manihot esculenta HOM05D000206 ORTHO05D002863 1.1e-11 73.9 152 39.5
AT4G23340 Arabidopsis thaliana HOM05D000206 ORTHO05D002863 1.4e-11 73.6 141 44.0
Cc02_g37970 Coffea canephora HOM05D000206 ORTHO05D002863 1.8e-11 73.2 149 43.0
Potri.002G159500 Populus trichocarpa HOM05D000206 ORTHO05D002863 2.4e-11 72.8 152 39.5
arahy.Tifrunner.gnm1.ann1.71XVTS Arachis hypogaea HOM05D000206 ORTHO05D002863 3.1e-11 72.4 145 41.4
BcaNung03268 Brassica carinata HOM05D000206 ORTHO05D002863 3.1e-11 72.4 141 44.0
Gohir.A11G022600 Gossypium hirsutum HOM05D000206 ORTHO05D002863 3.1e-11 72.4 144 38.9
Gohir.D11G022200 Gossypium hirsutum HOM05D000206 ORTHO05D002863 3.1e-11 72.4 144 38.9
Gorai.007G023600 Gossypium raimondii HOM05D000206 ORTHO05D002863 3.1e-11 72.4 144 38.9
Lsat_1_v5_gn_2_132721 Lactuca sativa HOM05D000206 ORTHO05D002863 3.1e-11 72.4 137 40.1
Nn1g01528 Nelumbo nucifera HOM05D000206 ORTHO05D002863 3.1e-11 72.4 152 38.8
Rhsim07G0015500 Rhododendron simsii HOM05D000206 ORTHO05D002863 3.1e-11 72.4 135 41.5
GSVIVG01019749001 Vitis vinifera HOM05D000206 ORTHO05D002863 3.1e-11 72.4 143 40.6
Atru.chr9.2182 Acer truncatum HOM05D000206 ORTHO05D002863 4.0e-11 72.0 136 39.0
PSO478G1319 Papaver somniferum HOM05D000206 ORTHO05D002863 4.0e-11 72.0 146 39.7
THA.LOC104806410 Tarenaya hassleriana HOM05D000206 ORTHO05D002863 4.0e-11 72.0 141 42.6
THA.LOC104813252 Tarenaya hassleriana HOM05D000206 ORTHO05D002863 4.0e-11 72.0 143 42.7
BcaNung01454 Brassica carinata HOM05D000206 ORTHO05D002863 5.3e-11 71.6 141 44.0
Manes.02G019500 Manihot esculenta HOM05D000206 ORTHO05D002863 5.3e-11 71.6 149 38.9
Oeu060668.1 Olea europaea HOM05D000206 ORTHO05D002863 5.3e-11 71.6 151 38.4
Potri.003G128100 Populus trichocarpa HOM05D000206 ORTHO05D002863 5.3e-11 71.6 136 41.2
Sed0026669 Sechium edule HOM05D000206 ORTHO05D002863 5.3e-11 71.6 144 43.1
Actinidia25886 Actinidia chinensis HOM05D000206 ORTHO05D002863 6.9e-11 71.2 141 40.4
Atru.chr1.846 Acer truncatum HOM05D000206 ORTHO05D002863 9.0e-11 70.9 138 42.0
arahy.Tifrunner.gnm1.ann1.GZ3INK Arachis hypogaea HOM05D000206 ORTHO05D002863 9.0e-11 70.9 145 42.1
MELO3C021211.2 Cucumis melo HOM05D000206 ORTHO05D002863 9.0e-11 70.9 146 41.1
PSO782G5073 Papaver somniferum HOM05D000206 ORTHO05D002863 9.0e-11 70.9 146 37.7
Phvul.010G098400 Phaseolus vulgaris HOM05D000206 ORTHO05D002863 9.0e-11 70.9 143 41.3
TPR.G23027 Trifolium pratense HOM05D000206 ORTHO05D002863 9.0e-11 70.9 143 38.5
BraA03t14485Z Brassica rapa HOM05D000206 ORTHO05D002863 1.2e-10 70.5 142 43.7
Migut.B01749 Erythranthe guttata HOM05D000206 ORTHO05D002863 1.2e-10 70.5 143 41.3
Lalb_Chr10g0097021 Lupinus albus HOM05D000206 ORTHO05D002863 1.2e-10 70.5 143 38.5
CsaV3_6G000540 Cucumis sativus L. HOM05D000206 ORTHO05D002863 1.5e-10 70.1 146 39.0
Ciclev10006410m.g Citrus clementina HOM05D000206 ORTHO05D002863 2.0e-10 69.7 145 39.3
ECA236G3867 Erigeron canadensis HOM05D000206 ORTHO05D002863 2.6e-10 69.3 149 39.6
Thhalv10025716m.g Eutrema salsugineum HOM05D000206 ORTHO05D002863 2.6e-10 69.3 151 40.4
Glyma.03G009600 Glycine max HOM05D000206 ORTHO05D002863 2.6e-10 69.3 143 41.3
PGR031G2350 Punica granatum HOM05D000206 ORTHO05D002863 2.6e-10 69.3 147 36.1
Carub.0007s1782 Capsella rubella HOM05D000206 ORTHO05D002863 3.4e-10 68.9 138 39.9
ECA232G0369 Erigeron canadensis HOM05D000206 ORTHO05D002863 3.4e-10 68.9 137 40.1
Lj1g0027251 Lotus japonicus HOM05D000206 ORTHO05D002863 3.4e-10 68.9 149 40.3
VMungo0331G1818 Vigna mungo HOM05D000206 ORTHO05D002863 4.4e-10 68.6 143 40.6
ClCG06G003700 Citrullus lanatus HOM05D000206 ORTHO05D002863 5.8e-10 68.2 146 40.4
Medtr7g077670 Medicago truncatula HOM05D000206 ORTHO05D002863 5.8e-10 68.2 148 39.2
Potri.003G106900 Populus trichocarpa HOM05D000206 ORTHO05D002863 5.8e-10 68.2 153 37.9
SalBow3G4599 Salvia bowleyana HOM05D000206 ORTHO05D002863 5.8e-10 68.2 137 39.4
Sp7g21270 Schrenkiella parvula HOM05D000206 ORTHO05D002863 5.8e-10 68.2 141 41.1
CARHR230690 Cardamine hirsuta HOM05D000206 ORTHO05D002863 7.6e-10 67.8 139 39.6
Nitab4.5_0000583g0030 Nicotiana tabacum HOM05D000206 ORTHO05D002863 7.6e-10 67.8 138 41.3
Cpa.g.sc13.278 Carica papaya HOM05D000206 ORTHO05D002863 9.9e-10 67.4 149 36.2
PGR042G0273 Punica granatum HOM05D000206 ORTHO05D002863 9.9e-10 67.4 139 43.2
A03p54240 Brassica napus HOM05D000206 ORTHO05D002863 1.3e-09 67.0 166 38.6
Eucgr.D02288 Eucalyptus grandis HOM05D000206 ORTHO05D002863 1.3e-09 67.0 149 36.2
Gohir.D11G043000 Gossypium hirsutum HOM05D000206 ORTHO05D002863 1.3e-09 67.0 142 39.4
SGA_v2.0_scaffold95G28839 Striga asiatica HOM05D000206 ORTHO05D002863 1.3e-09 67.0 141 41.8
CSS0007997 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002863 1.7e-09 66.6 137 38.7
Eucgr.E00625 Eucalyptus grandis HOM05D000206 ORTHO05D002863 1.7e-09 66.6 136 40.4
Gohir.A11G039700 Gossypium hirsutum HOM05D000206 ORTHO05D002863 1.7e-09 66.6 157 39.5
HanXRQChr14g0462381 Helianthus annuus HOM05D000206 ORTHO05D002863 1.7e-09 66.6 152 38.2
Ca_23635_v3 Cicer arietinum L. HOM05D000206 ORTHO05D002863 2.2e-09 66.2 143 38.5
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 2.9e-09 65.9 149 40.9
Oeu004104.1 Olea europaea HOM05D000206 ORTHO05D002863 2.9e-09 65.9 137 38.0
Hund16924 Selenicereus undatus HOM05D000206 ORTHO05D002863 3.8e-09 65.5 149 36.2
Sc01g0003420 Simmondsia chinensis HOM05D000206 ORTHO05D002863 3.8e-09 65.5 149 36.9
PGSC0003DMG400000170 Solanum tuberosum HOM05D000206 ORTHO05D002863 3.8e-09 65.5 131 42.7
Duzib205G0835 Durio zibethinus HOM05D000206 ORTHO05D002863 4.9e-09 65.1 131 38.9
Nitab4.5_0003745g0030 Nicotiana tabacum HOM05D000206 ORTHO05D002863 4.9e-09 65.1 138 40.6
Lj3g0003875 Lotus japonicus HOM05D000206 ORTHO05D002863 6.4e-09 64.7 141 36.2
Sopen01g038400 Solanum pennellii HOM05D000206 ORTHO05D002863 6.4e-09 64.7 131 42.7
Cc02_g02740 Coffea canephora HOM05D000206 ORTHO05D002863 8.4e-09 64.3 149 36.2
Migut.F01105 Erythranthe guttata HOM05D000206 ORTHO05D002863 8.4e-09 64.3 130 38.5
Peaxi162Scf00444g00424 Petunia axillaris HOM05D000206 ORTHO05D002863 8.4e-09 64.3 141 38.3
Peaxi162Scf00020g00213 Petunia axillaris HOM05D000206 ORTHO05D002863 1.1e-08 63.9 138 40.6
CAN.G78.75 Capsicum annuum HOM05D000206 ORTHO05D002863 1.4e-08 63.5 138 42.0
Ciclev10021101m.g Citrus clementina HOM05D000206 ORTHO05D002863 1.9e-08 63.2 144 37.5
COL.COLO4_34471 Corchorus olitorius HOM05D000206 ORTHO05D002863 1.9e-08 63.2 145 35.2
ECA238G3118 Erigeron canadensis HOM05D000206 ORTHO05D002863 1.9e-08 63.2 141 36.2
Psat4g154760 Pisum sativum HOM05D000206 ORTHO05D002863 1.9e-08 63.2 143 37.8
Medtr8g030880 Medicago truncatula HOM05D000206 ORTHO05D002863 2.4e-08 62.8 145 37.2
SalBow2G3606 Salvia bowleyana HOM05D000206 ORTHO05D002863 2.4e-08 62.8 141 35.5
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 2.4e-08 62.8 136 39.0
Glyma.09G259600 Glycine max HOM05D000206 ORTHO05D002863 3.2e-08 62.4 148 38.5
GSVIVG01028914001 Vitis vinifera HOM05D000206 ORTHO05D002863 3.2e-08 62.4 144 38.2
HanXRQChr09g0253471 Helianthus annuus HOM05D000206 ORTHO05D002863 4.2e-08 62.0 136 36.8
C07p52600 Brassica napus HOM05D000206 ORTHO05D002863 7.1e-08 61.2 168 36.9
BolC2t08186H Brassica oleracea HOM05D000206 ORTHO05D002863 7.1e-08 61.2 133 38.3
BolC7t45758H Brassica oleracea HOM05D000206 ORTHO05D002863 7.1e-08 61.2 168 36.9
AUR62004353 Chenopodium quinoa HOM05D000206 ORTHO05D002863 7.1e-08 61.2 149 37.6
C02p20500 Brassica napus HOM05D000206 ORTHO05D002863 9.3e-08 60.8 133 38.3
TWI81G0689 Tripterygium wilfordii HOM05D000206 ORTHO05D002863 9.3e-08 60.8 142 37.3
BcaC03g14615 Brassica carinata HOM05D000206 ORTHO05D002863 1.2e-07 60.5 133 38.3
A02p12390 Brassica napus HOM05D000206 ORTHO05D002863 1.2e-07 60.5 133 38.3
BraA02t06303Z Brassica rapa HOM05D000206 ORTHO05D002863 1.2e-07 60.5 133 38.3
Gorai.007G046300 Gossypium raimondii HOM05D000206 ORTHO05D002863 1.2e-07 60.5 143 38.5
Sabra03G0073700 Salix brachista HOM05D000206 ORTHO05D002863 1.2e-07 60.5 143 36.4
EL10Ac1g00420 Beta vulgaris HOM05D000206 ORTHO05D002863 1.6e-07 60.1 152 34.9
arahy.Tifrunner.gnm1.ann1.Y00ULH Arachis hypogaea HOM05D000206 ORTHO05D002863 2.7e-07 59.3 141 37.6
BcaB05g24011 Brassica carinata HOM05D000206 ORTHO05D002863 2.7e-07 59.3 133 37.6
CAN.G1175.9 Capsicum annuum HOM05D000206 ORTHO05D002863 3.5e-07 58.9 149 34.9
Lsat_1_v5_gn_7_4621 Lactuca sativa HOM05D000206 ORTHO05D002863 7.9e-07 57.8 146 34.2
ATR0680G094 Amborella trichopoda HOM05D000206 ORTHO05D002863 1.3e-06 57.0 135 37.0
AUR62022559 Chenopodium quinoa HOM05D000206 ORTHO05D002863 1.3e-06 57.0 149 36.9
CARHR264070 Cardamine hirsuta HOM05D000206 ORTHO05D002863 2.3e-06 56.2 133 36.1
Rhsim03G0187700 Rhododendron simsii HOM05D000206 ORTHO05D002863 3.9e-06 55.5 158 34.8
PGSC0003DMG400015796 Solanum tuberosum HOM05D000206 ORTHO05D002863 3.9e-06 55.5 141 34.0
VMungo1383G3120 Vigna mungo HOM05D000206 ORTHO05D002863 3.9e-06 55.5 153 32.7
Carub.0008s1134 Capsella rubella HOM05D000206 ORTHO05D002863 5.1e-06 55.1 133 35.3
Solyc03g025490.3 Solanum lycopersicum HOM05D000206 ORTHO05D002863 6.6e-06 54.7 141 33.3
Sopen03g004330 Solanum pennellii HOM05D000206 ORTHO05D002863 6.6e-06 54.7 141 33.3
Sp6g13510 Schrenkiella parvula HOM05D000206 ORTHO05D002863 8.7e-06 54.3 133 34.6


User provided reference genes

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