Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.2e-185 650.2 358 100.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.5e-184 648.3 358 99.7
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-182 642.9 358 96.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.1e-172 610.1 358 95.0
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.7e-167 590.5 338 95.9
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 5.6e-166 587.8 359 90.0
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 5.9e-139 498.0 359 78.8
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.8e-119 433.3 358 68.4
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 7.4e-118 427.9 359 70.5
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 2.2e-117 426.4 344 70.1
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 2.2e-117 426.4 358 68.4
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 4.8e-117 425.2 352 68.8
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 3.1e-116 422.5 343 70.8
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.6e-115 420.2 358 68.2
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.5e-115 418.7 354 68.4
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 6.5e-114 414.8 346 66.8
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 6.5e-114 414.8 355 67.3
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 5.5e-113 411.8 361 67.6
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.1e-112 409.8 346 67.9
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.4e-111 407.1 336 68.5
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.2e-111 405.2 361 63.7
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.5e-110 403.7 360 65.8
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 2.0e-110 403.3 355 66.8
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 2.6e-110 402.9 347 66.6
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 9.7e-110 401.0 360 67.5
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.3e-109 400.6 363 64.5
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.3e-109 400.6 353 63.7
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 6.3e-109 398.3 356 65.2
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.4e-108 397.1 333 70.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 5.3e-108 395.2 362 62.7
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 9.1e-108 394.4 363 64.2
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 3.8e-106 389.0 399 59.9
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 5.0e-106 388.7 358 62.3
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.5e-106 388.3 357 64.4
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.2e-105 386.0 359 62.4
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 3.6e-104 382.5 370 60.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.0e-103 380.9 374 59.4
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.4e-103 380.6 346 64.2
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 3.0e-103 379.4 349 63.9
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 3.0e-103 379.4 347 64.0
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 4.0e-103 379.0 347 64.0
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 4.0e-103 379.0 347 64.0
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 6.8e-103 378.3 349 63.6
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 2.6e-102 376.3 347 63.7
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 2.2e-101 373.2 363 62.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.7e-101 372.5 378 62.7
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 8.3e-101 371.3 350 61.7
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.4e-100 370.5 353 61.5
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 5.4e-100 368.6 380 58.4
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 4.5e-99 365.5 370 60.5
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 7.7e-99 364.8 372 60.5
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 1.7e-98 363.6 368 59.8
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.9e-98 362.8 348 60.9
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 3.8e-98 362.5 349 62.2
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.5e-97 360.5 350 60.9
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.9e-97 360.1 342 61.4
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 2.5e-97 359.8 341 59.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 4.2e-97 359.0 350 59.1
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 4.2e-97 359.0 364 58.8
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 5.5e-97 358.6 295 69.5
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.6e-96 357.1 359 61.8
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 6.1e-96 355.1 399 57.6
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 2.3e-95 353.2 313 66.5
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 3.0e-95 352.8 347 62.8
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.8e-93 346.3 286 68.5
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 3.1e-92 342.8 390 55.1
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 5.4e-92 342.0 343 60.9
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 5.9e-91 338.6 349 57.9
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 7.8e-91 338.2 357 57.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.9e-90 336.3 364 58.5
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.9e-89 333.6 353 59.2
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 3.3e-89 332.8 344 59.3
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 9.5e-89 331.3 375 57.9
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 4.7e-88 328.9 359 58.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 6.8e-87 325.1 352 55.7
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.5e-86 323.9 359 59.1
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.8e-86 322.0 355 56.9
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 7.5e-86 321.6 348 59.2
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.4e-84 316.6 352 56.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.3e-82 310.8 347 55.0
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 8.6e-82 308.1 349 55.9
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.5e-81 307.4 388 53.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.6e-80 302.8 300 59.3
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 4.7e-80 302.4 298 62.4
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 9.8e-78 294.7 360 50.8
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.4e-76 290.0 357 54.3
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 9.2e-76 288.1 404 49.8
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 8.1e-72 275.0 380 49.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.9e-69 265.8 373 48.8
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 3.5e-67 259.6 359 49.3
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 4.3e-65 252.7 309 52.4
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 1.2e-64 251.1 261 60.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.9e-61 240.0 344 45.3
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 3.6e-56 223.0 310 47.4
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 9.9e-54 214.9 343 47.2
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 8.4e-53 211.8 260 55.0
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.4e-52 211.1 410 38.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 9.3e-52 208.4 278 52.5
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.7e-51 206.8 276 48.9
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.1e-47 193.4 300 46.3
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 6.9e-47 192.2 273 46.2
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 5.8e-46 189.1 212 49.5
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 8.4e-45 185.3 167 66.5
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.7e-43 180.3 341 38.1
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 9.6e-41 171.8 190 58.9
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-39 167.9 137 73.0
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 9.0e-39 165.2 148 55.4
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.7e-37 161.0 115 74.8
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 8.2e-24 115.5 192 47.9
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 9.4e-20 102.1 62 85.5
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.2e-19 101.7 68 80.9
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 6.7e-18 95.9 166 47.6
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 8.8e-18 95.5 166 47.6
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 3.7e-16 90.1 295 33.9
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 5.9e-14 82.8 298 32.6
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.0e-10 72.0 36 88.9
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 8.8e-10 68.9 91 51.6
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.7e-08 64.7 68 58.8
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 4.1e-07 60.1 70 45.7
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 2.6e-06 57.4 280 27.5


User provided reference genes

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