Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1683 Fragaria x ananassa HOM05D017106 ORTHO05D013324 6.1e-115 417.5 218 100.0
FvH4_7g02110 Fragaria vesca HOM05D017106 ORTHO05D013324 8.9e-106 387.1 218 94.5
FAN03G1366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.7e-101 372.9 222 91.4
FAN06G2366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.0e-93 347.1 218 87.2
FvH4_7g01990 Fragaria vesca HOM05D017106 ORTHO05D013324 2.8e-59 232.6 222 62.6
FAN10G3260 Fragaria x ananassa HOM05D017106 ORTHO05D013324 4.6e-30 135.6 216 44.9
FAN01G2258 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.4e-29 134.0 160 54.4
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 3.6e-22 109.4 137 52.6
FvH4_7g04141 Fragaria vesca HOM05D017106 ORTHO05D013324 1.0e-13 81.3 205 38.5
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 1.1e-10 71.2 82 42.7
FAN04G1442 Fragaria x ananassa HOM05D016120 ORTHO05D013324 3.1e-10 69.7 101 40.6
FAN18G0925 Fragaria x ananassa HOM05D016120 ORTHO05D013324 4.1e-10 69.3 100 40.0
FvH4_5g27070 Fragaria vesca HOM05D016120 ORTHO05D013324 7.0e-10 68.6 100 40.0
FAN08G0332 Fragaria x ananassa HOM05D016120 ORTHO05D013324 7.0e-10 68.6 100 40.0
MD15G1430800 Malus domestica HOM05D000307 ORTHO05D013324 7.0e-10 68.6 209 29.2
FvH4_4g07700 Fragaria vesca HOM05D016120 ORTHO05D013324 9.1e-10 68.2 102 44.1
FAN13G0405 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.0e-09 67.0 100 39.0
FAN12G1561 Fragaria x ananassa HOM05D016120 ORTHO05D013324 3.5e-09 66.2 102 43.1
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 3.5e-09 66.2 92 39.1
MD02G1297800 Malus domestica HOM05D000307 ORTHO05D000166 7.7e-09 65.1 88 37.5
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 1.0e-08 64.7 207 27.5
FAN22G2097 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.7e-08 63.9 100 40.0
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 3.8e-08 62.8 73 41.1
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.8e-08 62.8 73 41.1
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.8e-08 62.8 73 41.1
Potri.002G255700 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.8e-08 62.8 72 43.1
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 5.0e-08 62.4 73 41.1
Potri.012G109900 Populus trichocarpa HOM05D000307 ORTHO05D000166 5.0e-08 62.4 72 43.1
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 6.5e-08 62.0 73 41.1
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 8.5e-08 61.6 210 27.1
COL.COLO4_22397 Corchorus olitorius HOM05D000307 ORTHO05D000166 1.5e-07 60.8 79 38.0
Eucgr.H02504 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.5e-07 60.8 73 42.5
Sabra02G0194300 Salix brachista HOM05D028904 ORTHO05D000166 1.5e-07 60.8 72 41.7
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.9e-07 60.5 73 39.7
Prupe.7G030200 Prunus persica HOM05D000307 ORTHO05D000166 1.9e-07 60.5 99 36.4
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 4.2e-07 59.3 78 38.5
Psat6g001960 Pisum sativum HOM05D000307 ORTHO05D000166 7.2e-07 58.5 77 41.6
Glyma.08G095300 Glycine max HOM05D008089 ORTHO05D000166 9.4e-07 58.2 81 40.7
Manes.15G161100 Manihot esculenta HOM05D028904 ORTHO05D000166 9.4e-07 58.2 72 38.9
Psat1g082000 Pisum sativum HOM05D000307 ORTHO05D000166 1.2e-06 57.8 78 39.7
Prupe.2G110900 Prunus persica HOM05D000307 ORTHO05D000166 1.6e-06 57.4 88 34.1
Eucgr.K02593 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.1e-06 57.0 93 32.3
VMungo0647G1946 Vigna mungo HOM05D008089 ORTHO05D000166 2.1e-06 57.0 71 40.8
Eucgr.H02508 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.7e-06 56.6 72 41.7
PGR042G3771 Punica granatum HOM05D000307 ORTHO05D000166 2.7e-06 56.6 76 36.8
AL8G35220 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 4.7e-06 55.8 70 35.7
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 4.7e-06 55.8 81 34.6
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 4.7e-06 55.8 88 39.8
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 4.7e-06 55.8 71 43.7
Nn4g24661 Nelumbo nucifera HOM05D000307 ORTHO05D000166 4.7e-06 55.8 77 35.1
PGR042G2078 Punica granatum HOM05D000307 ORTHO05D000166 4.7e-06 55.8 71 39.4
AT5G58890 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 6.1e-06 55.5 70 35.7
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 6.1e-06 55.5 77 40.3
Eucgr.F02794 Eucalyptus grandis HOM05D000307 ORTHO05D000166 6.1e-06 55.5 81 37.0
Thecc.01G119800 Theobroma cacao HOM05D000307 ORTHO05D000166 6.1e-06 55.5 79 34.2
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 8.0e-06 55.1 60 45.0
Eucgr.J02241 Eucalyptus grandis HOM05D000307 ORTHO05D000166 8.0e-06 55.1 93 32.3
Glyma.05G140000 Glycine max HOM05D000307 ORTHO05D000166 8.0e-06 55.1 87 36.8
Medtr6g005440 Medicago truncatula HOM05D008089 ORTHO05D000166 8.0e-06 55.1 76 38.2


User provided reference genes

Program Settings