Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 5.6e-51 204.1 115 100.0
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.6e-50 202.6 115 99.1
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.6e-50 202.6 115 99.1
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.8e-49 199.1 113 98.2
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 6.4e-39 164.1 121 80.2
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 4.6e-21 104.8 104 65.4
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.5e-19 99.8 115 56.5
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 9.4e-14 80.5 63 73.0
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 2.1e-13 79.3 64 71.9
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 1.0e-12 77.0 112 50.0
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 1.0e-12 77.0 63 69.8
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 3.0e-12 75.5 112 49.1
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 3.0e-12 75.5 68 64.7
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 1.1e-11 73.6 130 46.2
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 1.1e-11 73.6 61 68.9
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.5e-11 73.2 63 66.7
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 2.0e-11 72.8 109 48.6
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 2.0e-11 72.8 63 68.3
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 2.0e-11 72.8 63 66.7
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 2.0e-11 72.8 59 71.2
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 2.5e-11 72.4 64 59.4
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 2.5e-11 72.4 67 62.7
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 4.3e-11 71.6 63 66.7
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 5.7e-11 71.2 63 66.7
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 7.4e-11 70.9 99 49.5
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 9.7e-11 70.5 80 57.5
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 9.7e-11 70.5 59 66.1
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 9.7e-11 70.5 120 45.8
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 1.7e-10 69.7 107 46.7
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 2.8e-10 68.9 45 82.2
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 2.8e-10 68.9 99 47.5
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 6.3e-10 67.8 100 52.0
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 8.2e-10 67.4 63 58.7
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 1.1e-09 67.0 106 50.9
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 1.4e-09 66.6 101 45.5
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 1.4e-09 66.6 88 52.3
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 4.1e-09 65.1 76 53.9
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 5.3e-09 64.7 106 49.1
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 6.9e-09 64.3 102 43.1
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.2e-08 63.5 61 60.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 1.5e-08 63.2 129 42.6
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 2.0e-08 62.8 74 54.1
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 3.4e-08 62.0 64 59.4
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 7.7e-08 60.8 63 52.4
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 7.7e-08 60.8 74 52.7
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 1.3e-07 60.1 51 68.6
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.7e-07 59.7 81 49.4
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 2.2e-07 59.3 115 40.0
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 2.2e-07 59.3 75 52.0
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 5.0e-07 58.2 61 57.4
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 1.1e-06 57.0 77 51.9
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 1.9e-06 56.2 61 54.1
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 1.9e-06 56.2 108 40.7
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 2.5e-06 55.8 120 40.8
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 3.2e-06 55.5 60 53.3
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 5.5e-06 54.7 63 55.6


User provided reference genes

Program Settings